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Name : LC2W_1343 (LC2W_1343) Accession : YP_005856261.1 Strain : Lactobacillus casei LC2W Genome accession: NC_017473 Putative virulence/resistance : Unknown Product : succinyl-diaminopimelate desuccinylase Function : - COG functional category : - COG ID : - EC number : - Position : 1293018 - 1294208 bp Length : 1191 bp Strand : - Note : - DNA sequence : GTGCTCAACAAAACTCGCGCACAAAGTCTGCAACAGCTGACTGTCGCGACAAAGGATGGTGCAATCATGACAGAACCAAT TGCCCTGCTCCAAAAGCTGATTCAAATCAATTCTGTAAATGGCAACGAGCTCGCCGTCGCCAAATTGCTGCAAGCCGAAC TTGAGGCTGCCGATATTCCTACCAAGCTGATCCCCTACACAGAAGACCGCGTGAATTTAATTGCCGAATTAAACCATGGT GATCGCGTTCTCGGTTTCACTGGCCACGAAGATGTTGTGAGTCCTGGAGACGAGTCAGCCTGGACGTACCCACCTTTTTC CGGAAAAGTCGTCGACAATGTCATGTATGGTCGTGGCACCGATGATATGAAAAGCGGTTTAGCCGCCATGGTGCTGGCCC TGATCGCCCTCAAACAATCCGGGTTCACTCATCCGATTCGCTTGATTGCAACGGTAGGCGAAGAATACGGTGCGATGGGC GCTCGTTTGCTGACAGAGCAAGGCTATGCCGATGATCTCGCTGGCTTAGTTGTTGGTGAACCCACCACTAAAATCTTAAA ATATGCACATGCTGGCACCGTGAATTACGAGATTGACAGTGAAGGCGTCTCTGTCCATAGTTCTAGGCCTGAAAAAGGCG TCAATGCCATCGATGGTCTAACGACTTTTGCCGCACTGGAACATCACGCCTTTGATAAGGCGCCTGCTGACCCGGATCTC GGCCCATTTCGACATTCAATCACGGTCATCAATGGCGGCGACCAAGTCAACACCATTCCAGCCCACGCTTTCCTTCGTGG CAATCTTCGCCCGACCCCATCGGCCAATATTGAGCTGGTTGTGAAAATGCTTGAAGACTTAGTGGCACATGTCAACGCCA CGACCAATGCGAAACTCACGTTGAAAGTATTGCACCGTTTTCTGCCGGTTCACTCCGATAAAACAGGCCACTTGGTAACT TCGGCAAATGCTGCCATCGCGGCGGTAACTGGTAAACCAGCTGAATTAGCCGTTGCGTTTGGAGGAACCGATGCTTCCGA GTTCATCAAATCAACTAACCATTTTGATGTGATTGTCTATGGCCCCGGTGATAACCACTTCAGTCATCAAGTGAATGAAC ACATCGACCTGAACAGTTACACAACGGCGATCAAAATTTATCAAGAAATTGCCAAGCGCTTCTTCGAATAA Protein sequence : MLNKTRAQSLQQLTVATKDGAIMTEPIALLQKLIQINSVNGNELAVAKLLQAELEAADIPTKLIPYTEDRVNLIAELNHG DRVLGFTGHEDVVSPGDESAWTYPPFSGKVVDNVMYGRGTDDMKSGLAAMVLALIALKQSGFTHPIRLIATVGEEYGAMG ARLLTEQGYADDLAGLVVGEPTTKILKYAHAGTVNYEIDSEGVSVHSSRPEKGVNAIDGLTTFAALEHHAFDKAPADPDL GPFRHSITVINGGDQVNTIPAHAFLRGNLRPTPSANIELVVKMLEDLVAHVNATTNAKLTLKVLHRFLPVHSDKTGHLVT SANAAIAAVTGKPAELAVAFGGTDASEFIKSTNHFDVIVYGPGDNHFSHQVNEHIDLNSYTTAIKIYQEIAKRFFE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 8e-66 | 43 |
| unnamed | CAC20637.1 | - | Not tested | Internalin | Protein | 2e-66 | 43 |
