|
Name : LC2W_1172 (LC2W_1172) Accession : YP_005856090.1 Strain : Lactobacillus casei LC2W Genome accession: NC_017473 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : - COG ID : - EC number : - Position : 1138427 - 1139161 bp Length : 735 bp Strand : - Note : - DNA sequence : ATGCAAACAAATCAAGCGGTTCAGGTCAGCGCCCTTACCCAAGGCTATGGTAAACAGATCGTGCTTAAGGACATCAACTT GACCTTAAATCATGGTCAAATTCTTGCTTTAATCGGTCCTAGCGGTGCTGGCAAAACCACTTTAGTCAGTACCATTATGG GTATGTTGCGCCCACGCACCGGACAAGTCAGCGTTTTAGGGCAAGCCGTGCCGAATCGTCCCCTACTCGCGAAAATCGGC TTCATGGCTCAGACTGATGCTTTATATGAAAGTTTAACCGGTGCCGAGAACCTGACATTTTTTGCCAAAATGCAAGGCGT CCCACACGCGCAGATTGCCAAACAAATGGCTTATGCTGCCAATGTCGTCAATCTGCAACCGGCCTTAAAGCAACCAGTTA AGGATTATTCAGGCGGAATGAAGCGCCGATTATCGCTCGCCATCGCCCTCATCAGTCAACCGCAGTTGTTGATTTTAGAT GAACCGACCGTTGGCATTGACCCTGAGCTGCGTCAACAGATCTGGCATGAATTGCATCGTCTGGCGGATCAGGGTGTCGC CATTATTTTAACGACCCACGTCATGGCTGATGCCGAAGAAGCGGACACGTTATTGATGATTCGCAACGGGACTGCCATTG CCCAAGGGACACCGGCACAATTAAAGGCAGATTATCAAACGGACTCGATTGAAGCGGTCTTCTTAGCCGCAGGGAGGCAG CAAGATGCGCATTGA Protein sequence : MQTNQAVQVSALTQGYGKQIVLKDINLTLNHGQILALIGPSGAGKTTLVSTIMGMLRPRTGQVSVLGQAVPNRPLLAKIG FMAQTDALYESLTGAENLTFFAKMQGVPHAQIAKQMAYAANVVNLQPALKQPVKDYSGGMKRRLSLAIALISQPQLLILD EPTVGIDPELRQQIWHELHRLADQGVAIILTTHVMADAEEADTLLMIRNGTAIAQGTPAQLKADYQTDSIEAVFLAAGRQ QDAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH2613 | YP_254528.1 | hypothetical protein | Not tested | ¥ðSh2 | Protein | 3e-55 | 49 |
| SH0081 | YP_251996.1 | hypothetical protein | Not tested | SCCmec | Protein | 5e-42 | 48 |
| SE0094 | NP_763649.1 | ABC transporter ecsA-like protein | Not tested | SCCpbp4 | Protein | 4e-54 | 47 |
