|
Name : LC2W_0104 (LC2W_0104) Accession : YP_005855024.1 Strain : Lactobacillus casei LC2W Genome accession: NC_017473 Putative virulence/resistance : Unknown Product : Heavy metal translocating P-type ATPase Function : - COG functional category : - COG ID : - EC number : - Position : 114736 - 116595 bp Length : 1860 bp Strand : + Note : - DNA sequence : ATGAAAAAAAACAAGGCCATTATTTTTTATATGCTTGGCGTCATCACCTTCATTGGCGGCTTACTCATCACCCAACCGAT AGCTCGCGCGGCGTTGTTGGTTTTTGCCGCGATTGTTGCGGGTTATCAAGTGATTGCAGAAGGTATCATGGCAACGATTC AAGCAACTAGAAAACGGCACCGTTTTTCGCCAAATATTCATCTCCTCATGGCACTGGCTGCACTTGGCGCCATTGCGATT GGCAGTTTTGAAGAGGCCGCGATGCTAATTCTGATTTTTGCTGGCGCGCACTTTTTGGAGGAGTACGTTGAAAACAAGAG CCGCAAAGAAATTACGGCACTACTGGCTATGGCGCCTCAAGAAGCGCGGCGCTATACCGACACCGGTGCATTAGAAGTTG TACCAGTGACAGCATTAAACATCGGTGATCAACTACAGATTCTGAATGGCGCTCAGGTACCGACGGATGGCGTTATTATT GCCGGCACTGCTAGTCTCAATGAAGCTGCGATCAGCGGTGAAAGCATTCCCCGTGAAAAGCAAACCGGCGATGAGGTTTT TGGTGGGACCATCAACGGCAAGTCAACCTTTGATATGCGGGTTACCAAGTCAAGTGATGAAACAGTTTTTGCTAAGATTG TCCAGATGGTGCAGTCAGCCCAAGACTCCCCGACCAAAACAGCCAGCGTGATTCAACGTTTTGAGCCGATTTACGTGAAG GCGGTATTGGCTGTATTGCCGATTGTTTTACTTGCGGGACCATTTTTACTTCATTGGTCATGGGCAACCAGCATCTATCG CACGATCGTCTTCTTAGTGGCTGTGTCGCCATGTGCCTTGGCCGCCAGCGCGGTGCCGGCCACATTGTCAGGCATTTCAA GTCTGGCGCGGCAAGGGGTTCTTTTTAAAGGTGGCAGCTATTTAGCTAATCTGACCCAGTTAAAAGCCATTGCGTTTGAT AAAACCGGGACGTTGACGGAAGGCGTGCCAGTGGTGACGGACAGCGAATTTGTGTCGGATGTGGATGAAGCCGCCTTGAC TCAGATTATTACGGCAATGGAAATGCAAAGTAATCATCCGTTGGCGAATGCGATTGTGAGCCATTATTCAAAAAGTGATG TACCTATCACGGATGTGCATAACGAAATTGGCAAAGGCTTGACCGCTGAGTATCAGGGACACACTTACACCATTGGTAAG CCGCAGCGATTCAAGCAAGTTGATTCGGCATTTCGCAAGCGAGCCGCAACACTCAGTAAGCAAGGCAAAACCGTTGTTTT CGTTGCGGTCGATCAAAGGGTCGTTGGCCTGATCGCCTTGATGGATCAAGCAAAAAGCAGCGCTAAATCGGCCATTAATT ACCTTAAACGGCACGACATTCAACCGGTGATGATCACGGGGGATGCGCAACAAACCGGTGAAGCCGTGGCCGCCGACTTG GGCATTGATCAAGTGGTCGCTAATGTGATGCCCGAACAAAAGGTTGCCGTGGTCCGTGAGCTGCAGACCACCATGCGGCC CGTTGCCATGGTCGGCGACGGGGTCAATGATGCACCAGCCCTAGCCAATGCAGAGGTTGGCATCGCGATGGGATCAGGAA CTGATGTTGCCATTGATGTCGCCGATGTGGTTCTAGTCGAAAATGACCTTTCACGTCTAGCATTGGCCCATCAAGTTTCA ACTAAAATGAATCGCATTGTGATCGAGAACCTGTTACTCTCCATGGCTGTTGTTGTCATGCTGGTTGTCCTAAACGTCTT GCAACTCACCAACATTGCTTGGGGCGTCATGTTCCACGAAGGCAGCACGCTGATTGTCATCTTAAATGGCCTACGCTTGT TAATTCCGCAGAGAGCTTAA Protein sequence : MKKNKAIIFYMLGVITFIGGLLITQPIARAALLVFAAIVAGYQVIAEGIMATIQATRKRHRFSPNIHLLMALAALGAIAI GSFEEAAMLILIFAGAHFLEEYVENKSRKEITALLAMAPQEARRYTDTGALEVVPVTALNIGDQLQILNGAQVPTDGVII AGTASLNEAAISGESIPREKQTGDEVFGGTINGKSTFDMRVTKSSDETVFAKIVQMVQSAQDSPTKTASVIQRFEPIYVK AVLAVLPIVLLAGPFLLHWSWATSIYRTIVFLVAVSPCALAASAVPATLSGISSLARQGVLFKGGSYLANLTQLKAIAFD KTGTLTEGVPVVTDSEFVSDVDEAALTQIITAMEMQSNHPLANAIVSHYSKSDVPITDVHNEIGKGLTAEYQGHTYTIGK PQRFKQVDSAFRKRAATLSKQGKTVVFVAVDQRVVGLIALMDQAKSSAKSAINYLKRHDIQPVMITGDAQQTGEAVAADL GIDQVVANVMPEQKVAVVRELQTTMRPVAMVGDGVNDAPALANAEVGIAMGSGTDVAIDVADVVLVENDLSRLALAHQVS TKMNRIVIENLLLSMAVVVMLVVLNVLQLTNIAWGVMFHEGSTLIVILNGLRLLIPQRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | YP_005732869.1 | cadmium-translocating P-type ATPase | Not tested | Type-V SCCmec | Protein | 7e-136 | 53 |
| SE0062 | NP_763617.1 | copper-transporting ATPase copA | Not tested | SCCpbp4 | Protein | 6e-136 | 53 |
