Gene Information

Name : LC2W_0971 (LC2W_0971)
Accession : YP_005855889.1
Strain : Lactobacillus casei LC2W
Genome accession: NC_017473
Putative virulence/resistance : Unknown
Product : ClpP protease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 949028 - 949735 bp
Length : 708 bp
Strand : +
Note : -

DNA sequence : 
ATGACGACAGTGGTACCGATTAAAGGTGACATCGTTACTAATGATTACGGATGGCTTTACGATCTATTTGGCGATGACTA
TGCTTCACCTAAAAGCGTCTCTGATCTAATTAACAAGGCTAATGGTGATGACTTATCCGTTGAGATCAATTCAGGTGGAG
GAATTCTCGATGCCGGCTCTGAAATTTACACCATGCTTCGTGCTTATAAAGGACCGGTCAATGTGAACGTTGTGGGTGTG
GCATATTCCGCTGCATCTTTGATCGCGATGGCGGGTGATGTCGTAGCCGTGTCACCTGCAGGGATGATGATGATCCACAA
TGTCTCCAGTGGACAGATGGGTGACTATCATGACATGCAGAATGCTGCGGACTCGTTAAAGAAGTCAAACATAGCAATAG
CTAATGCCTATATGGCCAAGACGGGTCTATCTCAAACAGAAATCCTTGACTTGATGGATTCAACTTACTGGCTGGATCCG
CAGACAGCCATTGAAAAAGGGTTTGCTGACAAGATGATGTTTGACAATGCGGAGAAGCCAGGGAAAATGATCATGACTGC
TAGCCTGAATAAGATTCCAAGTCTTGCCACGCTGAACCAAATGAAACACTTCCGAAACACAACAGCACTAAAAAAAGCGC
CGTCTGATGATGATCAGATGGCGCTTTTGAATGCAGAATACAATCTCTTAAATTTGAAAGGGGAATAA

Protein sequence : 
MTTVVPIKGDIVTNDYGWLYDLFGDDYASPKSVSDLINKANGDDLSVEINSGGGILDAGSEIYTMLRAYKGPVNVNVVGV
AYSAASLIAMAGDVVAVSPAGMMMIHNVSSGQMGDYHDMQNAADSLKKSNIAIANAYMAKTGLSQTEILDLMDSTYWLDP
QTAIEKGFADKMMFDNAEKPGKMIMTASLNKIPSLATLNQMKHFRNTTALKKAPSDDDQMALLNAEYNLLNLKGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAV1964 NP_372488.1 phiN315 scaffolding protein-like protein Not tested ¥ÕSa3 Protein 2e-27 43
SA1775 NP_375073.1 hypothetical protein Not tested ¥ÕSa3 Protein 2e-27 43
SAUSA300_1939 YP_494590.1 phi77 ORF015-like protein protease Not tested ¥ÕSa3 Protein 2e-27 43
SAUSA300_1939 YP_494590.1 phi77 ORF015-like protein protease Not tested ¥ÕSa3 Protein 2e-27 43
SAOV_1103 YP_005736598.1 Prophage Clp protease-like protein Not tested ¥ÕSa2 Protein 2e-27 42
SAKOR_01943 YP_008492131.1 ATP-dependent endopeptidase clp proteolytic subunit clpP Not tested ¥ÕSa3 Protein 2e-27 42