Gene Information

Name : LAB52_10248 (LAB52_10248)
Accession : YP_005854918.1
Strain :
Genome accession: NC_017472
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 72658 - 73836 bp
Length : 1179 bp
Strand : +
Note : COG3328 Transposase and inactivated derivatives

DNA sequence :
ATGAATGATTTTACCAAAAATATGGCACAAGCTCTATTCAATCAAGACAAAATAAACGATTTATTGCGCAAAGAACTCCA
GCAAACAGTTAATGACCTATTGGAAGCTGAACTGACTGCGTTTTTAGGCTATGATCCTTATGCCAGAGCTGGCTGGAATA
CAGGCAATTCACGCAATGGTGCTTACTTTCGCAAGGTTGATACGCAATTTGGCGAGATTGAAATTCAGGTGCCTAGGGAT
CGCAACGGCATGTTTCATCAGCACACGCTCCCTGACTACAAGCAGCACTCCGATGTCTTGGAAAGCATGATTATCAAGCT
ATATTCCAAAGGCGTAACCACCAGAGAAATAGCCGACTTGATTGAAAAGATGTATGGCAGTCATTACAGCCCAGCTCAGG
TATCTAACATCTCCAAGCAGATGATTCCAAAAGTCGAGGCCTATCATCAGCGCAAACTCAGTGACAAGTTCTTCTGCGTT
TATTTGGACGCTACCTACATTCCTTTGCGTCGCATAACCTTTGATCGTGAAGCAGTTTATATTGCCATTGGCATCAAGCC
TAATGGCCACAAGGAAATCATCGATTACCGCATTGCTCCCAGCGAAAACGTCGAGAATTGGACGGAAATGCTTCAAGACA
TGAAGTCTCGCGGTCTAGAACAGGTTGAGCTCTTTCTTTCAGATGGCGTTGTGGGCATGAAGACAGTGCTGGAGCAGACT
TATCCGAAAGCTCATTTTCAACGCTGTCTAGTTCATGTCATGCGCAATATTTGCGCTAAAGTACGCGTAGATGATCGCGA
AACGATCATGAATGAATTCAAGCAAATTCATCAACAGCAAAATAAAGAAGCTGCGATCAAAGTCTTGCACGCCTTCTATG
ACAAGTGGAACAGAGCGTACAACCATGTCATCAGAAATCTCAAAGATATTGAGCCTGATCTGCTGGTCTTTTACAGCTAT
CCTAAGCAGATCAGGGCTTCAATTTACTCTACCAATATGATCGAATCCTTTAACAACGTTATCAAGCGTAAAGCTAAGCC
TAAAGCAGAGTTTCCAACTGAACAGTCGCTTGATACTTTTATTGGCATTCAGGCAATGAGCTACAACGAACGCTATTTCA
ATCGAATCCACAAAGGCTTTGGTCAGGTTCAGGATACCTTAGAATCCTACTTTGATTAA

Protein sequence :
MNDFTKNMAQALFNQDKINDLLRKELQQTVNDLLEAELTAFLGYDPYARAGWNTGNSRNGAYFRKVDTQFGEIEIQVPRD
RNGMFHQHTLPDYKQHSDVLESMIIKLYSKGVTTREIADLIEKMYGSHYSPAQVSNISKQMIPKVEAYHQRKLSDKFFCV
YLDATYIPLRRITFDREAVYIAIGIKPNGHKEIIDYRIAPSENVENWTEMLQDMKSRGLEQVELFLSDGVVGMKTVLEQT
YPKAHFQRCLVHVMRNICAKVRVDDRETIMNEFKQIHQQQNKEAAIKVLHAFYDKWNRAYNHVIRNLKDIEPDLLVFYSY
PKQIRASIYSTNMIESFNNVIKRKAKPKAEFPTEQSLDTFIGIQAMSYNERYFNRIHKGFGQVQDTLESYFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0595 NP_814357.1 ISEf1, transposase Not tested Not named Protein 4e-103 51
unnamed AAM21176.1 transposase Not tested Not named Protein 2e-103 51
unnamed AAM21184.1 transposase Not tested Not named Protein 2e-103 51
ef0057 AAM75262.1 EF0057 Not tested Not named Protein 2e-103 51