Gene Information

Name : join (LAB52_09863)
Accession : YP_005854844.1
Strain :
Genome accession: NC_017471
Putative virulence/resistance : Unknown
Product : transposase IS1201
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4190 - 818 bp
Length : 1170 bp
Strand : +
Note : COG3328 Transposase and inactivated derivatives

DNA sequence :
ATGAATGATTTTACCAAAAATATGGCACAAGCTCTATTCAATCAAGACAAAATAAACGATTTATTGCGCAAAGAACTCCA
GCAAGCAGTTAATGACCTATTAGAGGCTGAACTGACTGCGTTTTTAGGCTATGATCCTTATGCCAGAGCTGGCTGGAATA
CAGGCAATTCACGCAATGGTGCTTACTTTCGCAAAGTTGATACGCAATTTGGCGAGATTGAAATTCAGGTGCCTAGGGAC
CGCAACGGCATGTTTCATCAGCACACGCTCCCTGACTACAAGCAGCACTCCGATGTCTTGGAAAGCATGATTATCAAGCT
ATATTCCAAAGGCGTAACCACCAGAGAAATAGCCGACTTGATTGAAAAGATGTATGGCAGTCATTACAGCCCAGCTCAGG
TATCTAACATCTCCAAGCAGATGATTCCAAAAGTCGAGGCCTATCATCAGCGCAAATTCAGTGACAAGTTCTTCTGCGTT
TATTTGGACGCTACCTACATTCCTTTGCGTCGCATAACCTTTGATCGTGAAGCAGTTTATATTGCCATTGGCATCAAGCC
TAATGGTCACAAGGAAGTCATCGATTACCGCATTGCTCCCAGCGAAAACGTCGAGAATTGGACGGAAATGCTTCAAGACA
TGAAGTCTCGCGGTCTTGAGCTCTTTCTTTCAGATGGCGTTGTGGGCATGAAGACAGTGCTGGAGCAGACTTATCCGAAA
GCTCATTTTCAACGCTGTCTAGTTCATGTCATGCGCAATATTTGCGCTAAAGTACGCGTAGATGATCGCGAAACGATCAT
GAATGAATTCAAGCAGATTCATACTCAGTCAAACAAAGAAATGGCTGTACAGGTGCTGCATGAATTCTATCAAAACTGGG
AAAAAGCCTACAAAAACGTAGTTAGAGATCTTAGACAGGTTGAGCCTGATCTGTTAACCTTTTACAACTATCCGCCAGCT
ATTAGAGCTTCAATTTACTCAACTAACATGATTGAATCCTTTAACAACAGGCTTAAGCGGAAAACCAAGCCTAAAACAGA
ATTTCCAACTGAGCAGTCGCTTGACACCTTTATTGGAGTTCAGGCAATGGATTACAATGACCGTTACTTTAACAGGATTC
ATAAAGGATTTGGGCAAGTTCGAGACACCCTAGAATCCTACTTTGATTAA

Protein sequence :
MNDFTKNMAQALFNQDKINDLLRKELQQAVNDLLEAELTAFLGYDPYARAGWNTGNSRNGAYFRKVDTQFGEIEIQVPRD
RNGMFHQHTLPDYKQHSDVLESMIIKLYSKGVTTREIADLIEKMYGSHYSPAQVSNISKQMIPKVEAYHQRKFSDKFFCV
YLDATYIPLRRITFDREAVYIAIGIKPNGHKEVIDYRIAPSENVENWTEMLQDMKSRGLELFLSDGVVGMKTVLEQTYPK
AHFQRCLVHVMRNICAKVRVDDRETIMNEFKQIHTQSNKEMAVQVLHEFYQNWEKAYKNVVRDLRQVEPDLLTFYNYPPA
IRASIYSTNMIESFNNRLKRKTKPKTEFPTEQSLDTFIGVQAMDYNDRYFNRIHKGFGQVRDTLESYFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAM21184.1 transposase Not tested Not named Protein 1e-100 51
ef0057 AAM75262.1 EF0057 Not tested Not named Protein 1e-100 51
EF0595 NP_814357.1 ISEf1, transposase Not tested Not named Protein 2e-100 51
unnamed AAM21176.1 transposase Not tested Not named Protein 1e-100 51