Gene Information

Name : LAB52_04780 (LAB52_04780)
Accession : YP_005853917.1
Strain : Lactobacillus amylovorus GRL1118
Genome accession: NC_017470
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 942355 - 944124 bp
Length : 1770 bp
Strand : +
Note : COG0469 Pyruvate kinase

DNA sequence :
ATGAAGAAAACTAAGATTGTTAGTACTTTAGGGCCAGCTTCAAACGATATTGAAACTATTACCGCTTTAGCAAAAGCTGG
TGCAAACGTATTCCGTTTCAACTTCTCACACGGTGACCACCCAGAACACCTTGCTCGTATGAAGATGGTTCGTCAAGTGG
AAAAGGATACTGGTTTGCTTCTTGGTATCGACCTTGACACTAAGGGTGCTGAAATCAGAACCACTGAACAAGAAGGTGGC
AAGTTTACTATTAACACCGGTGACATGATCCGTGTATCAATGGATGCTACCAAGAAGGGTAACAAGGACATGATCCACGT
TACCTACGATGGTTTGTACGATGATACTCACGTTGGTGGTCACGTATTAATCGATGACGGTTTGGTTGACCTTTTGATCA
AGGAAAAGGACGACTCAAAGAGAGAATTAGTTTGTGAAGCTCAAAACACTGGTGTTATCGGTTCAAAGAAGGGTGTTAAC
GCTCCTGGCGTTGAAATCCGCCTCCCAGGTATCACTGAAAAGGATACTGACGACATCAAGTTCGGTTTGAAGTTCGGTAT
TAACTTCATTACTGCTTCATTTGCACGTAAAGCTCAAGATATCTTAGATATCCGTAAGCTTTGTGAAGAAGCAGGTGCAG
ACTACGTTAAGATCTTCCCTAAGATTGAATCACAAGAAGGTATTGACAACGCTGACGAAATCTTGCAAGTATCAGATGGT
TTGATGGTTGCTCGTGGTGACATGGGTGTTGAAATTCCATTCATGGAAGTTCCATTTGTACAAAAAAGCTTAATCCGTAA
GGCTAACGCACTTGGTAAGCCAGTTATCACTGCTACCCAAATGCTTGACTCAATGCAAGAAAACCCACGTCCAACTCGTG
CCGAAGTTTCAGACGTTGCTAACGCTGTTCTTGATGGTACTGACGCAACTATGCTTTCAGGTGAATCAGCAAACGGTCTT
TACCCAGTTAAGGCTGTTAAGGCTATGGCTGAAATTGACGAACGTACTGAAAAGCAAATGCTTAAGCGTAACACTTTAGC
ACTTCAAAGATTCGAAGCTTACAAGGGTTCAAACGTAACCGAAGCTATTGGTGAATCAGTTGTACGTACTGCTCAAGAAT
TAGGTGTTAAGACTATCATTACTGCAACTAATTCAGGTTACACTGCACGTATGATTTCTAAGTACCGTCCAAACGCAGAC
ATCATTGCATTGACCTTCGACGAAAAGATTCAACACTCATTAGGTATTGTTTGGGGCGTTCAACCAGTATTGACTGAAAA
GCCTAAGTCAACTGATGACATGTTTGAAGTAGCTGCTAAGGTAGCTAAGGAAAAGGGCTTTGTTAAGGATGGCGACCTTG
TAATCATCGTTGCCGGTGTTCCAGTTGGTGACTCAGGTACTACTAACTTGATGAAGTTACAAATCATCGGTGACAAGCTT
GTTCAAGGTTTAGGTGTTGGTAACGGTTCAGTTATCGGCAAGGCCGTTGTAGCAAACTCAGCAGAAGAAGCTAACAGCAA
AGTTAAGGAAGGCGACATCTTAGTTGCTAAGACTACTGACCCTGACTACAACCCAGCTATTAAGAAGGCTTCAGGCTTAG
TTGTTGAAGCTTCAGGTTTAACTTCACACGCAGCAGTTATCGGCTTATCATTAGGTATCCCAGTTGTTGTTGGTGCTACT
GACGCAACTTCAAAGATTTCTGATGGTTCAACTATTACTGTTGACGCTCGTCGTGGTGCTATCTACCAAGGTGAAATCTC
AAACCTTTAA

Protein sequence :
MKKTKIVSTLGPASNDIETITALAKAGANVFRFNFSHGDHPEHLARMKMVRQVEKDTGLLLGIDLDTKGAEIRTTEQEGG
KFTINTGDMIRVSMDATKKGNKDMIHVTYDGLYDDTHVGGHVLIDDGLVDLLIKEKDDSKRELVCEAQNTGVIGSKKGVN
APGVEIRLPGITEKDTDDIKFGLKFGINFITASFARKAQDILDIRKLCEEAGADYVKIFPKIESQEGIDNADEILQVSDG
LMVARGDMGVEIPFMEVPFVQKSLIRKANALGKPVITATQMLDSMQENPRPTRAEVSDVANAVLDGTDATMLSGESANGL
YPVKAVKAMAEIDERTEKQMLKRNTLALQRFEAYKGSNVTEAIGESVVRTAQELGVKTIITATNSGYTARMISKYRPNAD
IIALTFDEKIQHSLGIVWGVQPVLTEKPKSTDDMFEVAAKVAKEKGFVKDGDLVIIVAGVPVGDSGTTNLMKLQIIGDKL
VQGLGVGNGSVIGKAVVANSAEEANSKVKEGDILVAKTTDPDYNPAIKKASGLVVEASGLTSHAAVIGLSLGIPVVVGAT
DATSKISDGSTITVDARRGAIYQGEISNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 3e-73 47
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-73 47
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-73 47
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-73 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LAB52_04780 YP_005853917.1 pyruvate kinase VFG0479 Protein 5e-74 47