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Name : LAB52_04540 (LAB52_04540) Accession : YP_005853876.1 Strain : Lactobacillus amylovorus GRL1118 Genome accession: NC_017470 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : - COG ID : - EC number : - Position : 898428 - 899477 bp Length : 1050 bp Strand : + Note : COG2826 Transposase and inactivated derivatives, IS30 family DNA sequence : ATGGACTCTTTACATTTTACCATGAATCAGCACGTTAAAGGCAAGCACTTATCATTTGAAGAGCGGGTTGTTATCCAAAC ACGTTTAAAAGATGGTTATTCTATTAGAGCGATTGCTCGCGAATTGGGCTGCTCTCCTTCTACAATTAGCTATGAGGTCA AACGTGGTACTGTTTCTCTCTATCATGGCAAGCAGCAGCGCTATAAGGCTGAACATGGTCAAGGTGTTTATCAGATTAAT CGTCGTCACTGTGGTCGTAAATCGGACTTCTTGAAGAAAGCAAACTTTATTAGCTACGTCATTAATCATTTTTTTGAGGA CGGCTGGTCACTTGACGTTTGTGCCAATCGTAGTTTAGCTATCGGTGAATTCTCACATCATCAAACAGTCTGCACCAGAA CTTTGTACAACTATGTAGAACAAGGCCTAATTGCAATTAAGAACTATGATTTGCCTGAAAAAATTAAACGTAATACCAAG CTCCATCATGTTCGCAAAAACAAGAAAAAGCTGGGACGAAGCATCGAAGAGCGGCCTAAAGAGATTGACCAGCGCAATGA ATTTGGTCATTGGGAATGTGATCTTGTTCTAGGGCATAAAACCAAAGATGATCAGGTTCTATTAACGCTTTCTGAGCGCA TGAGCCGTGAATTCTTGATTATTCGCATACCTGACAAGACATCTGTCAGTGTCATGCAGGCTTTTAAAATGCTTCAAAAA CAATACAGCGAGCACTGGAATGACATCTTCAAGACGATTACTACTGACAATGGTTCAGAGTTTGCGGATTTAGCTAATTT AGAAGAAGTTTCTAAGACTCTTGTTTATTATGCTCATCCTTATACTTCTTGTGATAAAGGAACTGTTGAAAGACATAATG GTCTTATTCGCAGATTCATTCCTAAAGGAGACTGCATCAATAACTATTCTCTCCAACAAATCATTGATATTGAAACCTGG TGCAACTCTTTACCCAGAAAGATCCTGGCATATCACACACCAGATGAAATCTTCGAAAGAGAATTAGATCGCATCTATCA AACAGCCTAA Protein sequence : MDSLHFTMNQHVKGKHLSFEERVVIQTRLKDGYSIRAIARELGCSPSTISYEVKRGTVSLYHGKQQRYKAEHGQGVYQIN RRHCGRKSDFLKKANFISYVINHFFEDGWSLDVCANRSLAIGEFSHHQTVCTRTLYNYVEQGLIAIKNYDLPEKIKRNTK LHHVRKNKKKLGRSIEERPKEIDQRNEFGHWECDLVLGHKTKDDQVLLTLSERMSREFLIIRIPDKTSVSVMQAFKMLQK QYSEHWNDIFKTITTDNGSEFADLANLEEVSKTLVYYAHPYTSCDKGTVERHNGLIRRFIPKGDCINNYSLQQIIDIETW CNSLPRKILAYHTPDEIFERELDRIYQTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_0628 | YP_697955.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-77 | 50 |
| CPR_0379 | YP_697708.1 | IS1470, transposase | Not tested | Not named | Protein | 1e-77 | 50 |
| CPR_1078 | YP_698400.1 | IS1470, transposase | Not tested | Not named | Protein | 6e-78 | 50 |
| CPR_0383 | YP_697712.1 | IS1470, transposase | Not tested | Not named | Protein | 5e-78 | 50 |
| CPR_0314 | YP_697643.1 | IS1470, transposase | Not tested | Not named | Protein | 5e-78 | 50 |
| CPR_0967 | YP_698290.1 | IS1470, transposase | Not tested | Not named | Protein | 5e-78 | 50 |
| CPR_0648 | YP_697974.1 | IS1470, transposase | Not tested | Not named | Protein | 1e-78 | 50 |
| CPR_1088 | YP_698410.1 | IS1470, transposase | Not tested | Not named | Protein | 5e-77 | 50 |
| CPR_0321 | YP_697650.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-77 | 50 |
| CPR_0659 | YP_697986.1 | IS1470, transposase | Not tested | Not named | Protein | 4e-52 | 46 |
