Gene Information

Name : LAB52_04465 (LAB52_04465)
Accession : YP_005853861.1
Strain : Lactobacillus amylovorus GRL1118
Genome accession: NC_017470
Putative virulence/resistance : Virulence
Product : choloylglycine hydrolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 875553 - 876530 bp
Length : 978 bp
Strand : -
Note : COG3049 Penicillin V acylase and related amidases

DNA sequence :
ATGTGTACTTCAATTGTGTTTAGTCCTAAAGATCACTACTTTGGTCGTAATCTTGACCTAGAAATAACTTTCGGTCAGCA
AGTCGTGATTACCCCTCGCAACTATGATTTTAAGTTCCGCAAGATGCCGGAATTAAAACAACATTACGCTATGGTAGGAA
TCGCCCTTAATGCTGGCGGCTATCCTTTATACTTTGATGCTGCTAATGAAAAGGGCTTGGGAATGGCCGGACTAAATTAT
CCTGGCAATGCCACTTACTATGACGTCAAAGATGGTAAAGACAATGTTGCTTCTTTTGAATTCATCCCTTGGATTTTGGG
CCAATGTGCTACAGTAGAAGAAGCTAAGAAATTGCTTGCCAAAATCAACATTGCTGACATCAACTTTAGCGAAAAAATGG
TTGCTTCTAAACTTCACTGGTTAATTGCCGATAAAACCGGCACTTCAATTGTTGTTGAAACTGATAAAGATGGTATGCAT
GTTTACGATAACCCTGTTGGCTGCTTAACTAACAACCCACAATTCCCTAAGCAATTGTTCAACTTAAACAACTACGCAGA
TGTTTCTGCCGCAATGCCAAAGAACAACTTCTCAGATCAAGTTAAAATGGACGGCTACAGCCGCGGCTTAGGTTCACGCA
ATTTGCCAGGTGGTATGGATTCAGAATCTCGTTTTGTCAGAGTAGCCTTCAACAAGTTTAACGCCCCTACTTCCGATTCT
GAAGAAGAAAACGTGGACACTTACTTCCATATTCTGCATTCAGTAGAACAACAAAAAGGCCTGGATCAAGTCGGCCCAGA
TGCTTTTGAGTACACTATTTACTCTGATGGTATCAATTTGGATAAAGGTATCTTCTACTACACTACTTACACTAATAAGC
AAATCAACGTAGTTGATATGAATAAAGAAGATTTAGACAGCAGTGATTTAATTACTTACGATATGCTCACTAAAGGTAAA
TTTAATCATCAAAACTAA

Protein sequence :
MCTSIVFSPKDHYFGRNLDLEITFGQQVVITPRNYDFKFRKMPELKQHYAMVGIALNAGGYPLYFDAANEKGLGMAGLNY
PGNATYYDVKDGKDNVASFEFIPWILGQCATVEEAKKLLAKINIADINFSEKMVASKLHWLIADKTGTSIVVETDKDGMH
VYDNPVGCLTNNPQFPKQLFNLNNYADVSAAMPKNNFSDQVKMDGYSRGLGSRNLPGGMDSESRFVRVAFNKFNAPTSDS
EEENVDTYFHILHSVEQQKGLDQVGPDAFEYTIYSDGINLDKGIFYYTTYTNKQINVVDMNKEDLDSSDLITYDMLTKGK
FNHQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0521 NP_814299.1 choloylglycine hydrolase Not tested Not named Protein 3e-91 58
ef0040 AAM75246.1 EF0040 Not tested Not named Protein 2e-91 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LAB52_04465 YP_005853861.1 choloylglycine hydrolase VFG2162 Protein 2e-93 58