Gene Information

Name : LAB52_02425 (LAB52_02425)
Accession : YP_005853471.1
Strain : Lactobacillus amylovorus GRL1118
Genome accession: NC_017470
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 475852 - 476700 bp
Length : 849 bp
Strand : -
Note : COG2801 Transposase and inactivated derivatives

DNA sequence :
TTGAACTATGTCTTAGATGCAATTGCAGAGCATCCAGAGCTGCCTACGATTGCCAGAAGTTCTTACTATAAAATAATTAA
ACGAAAGCCTAAGAAGCCCAAGCGTTCCAAACTTATTGCAAGGATCAAGGAAATATTTAATCGTCACAAAGGACGCTATG
GCTATCGTCGAGTGGCACTCCAGTTAATAAAAGAAGGCTGGAATATTACTGAGAAAATAGTCCGTTACTGGATGCATAAA
TTGGGTCTTAAGGGTATCAGACGCAACAAGCGTAAGTATTCAAGCTACAAGGGAACTATTGGCAAGATAGCCCCTAATTT
AATTCGTCGTGATTTCTTTGCGCCAATGTCCAACATGAAATGGTACACTGACATTACTGAATTTCATCTCAATGGTGAAA
AGCTTTATCTATCACCTATTTTGGATGGTTGTGGAGGCGATATAGTCTCTTACACTATTTCCAAACATCCAGACATGGAG
TTAGTAATGACAATGCTTGATAGGGCTTTTGCCAAGGAAACGGCTCTTAATAATTGCATCTTTCATACTGATCAGGGCTG
TCAATACCAAAGTCCAAGATATCAGCGTGCTTTAAAGCTTCATGGTATTACTCAAAGCATGTCTAGAAAAGGTAATTCCA
TGGATGATGGGCTAATGGAAAACTTCTTTGGCTTGCTCAAAACAGAGATGTTCTATGATCAAGAATACAAGTACCATAGT
CTTCAAGAATTAGCTCAAGCAATCGAAGAATATATCGAATACTATAACGAAGAAAGGATAAAGAGCAGATTAAAAGGCTT
AACTCCGAAAGAATATCGGAATCAAGCCTCTATTAATCCTGTATTTTAA

Protein sequence :
MNYVLDAIAEHPELPTIARSSYYKIIKRKPKKPKRSKLIARIKEIFNRHKGRYGYRRVALQLIKEGWNITEKIVRYWMHK
LGLKGIRRNKRKYSSYKGTIGKIAPNLIRRDFFAPMSNMKWYTDITEFHLNGEKLYLSPILDGCGGDIVSYTISKHPDME
LVMTMLDRAFAKETALNNCIFHTDQGCQYQSPRYQRALKLHGITQSMSRKGNSMDDGLMENFFGLLKTEMFYDQEYKYHS
LQELAQAIEEYIEYYNEERIKSRLKGLTPKEYRNQASINPVF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 1e-49 53
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 1e-49 52
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 1e-45 51
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 5e-42 49
CDBH8_0905 YP_005159997.1 transposase-like protein Not tested Not named Protein 7e-31 42
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 2e-31 42