|
Name : LAB52_01300 (LAB52_01300) Accession : YP_005853250.1 Strain : Lactobacillus amylovorus GRL1118 Genome accession: NC_017470 Putative virulence/resistance : Unknown Product : alpha,alpha-phosphotrehalase Function : - COG functional category : - COG ID : - EC number : - Position : 258182 - 259804 bp Length : 1623 bp Strand : + Note : COG0366 Glycosidases DNA sequence : ATGACTCCATGGTGGAAAAAAGCAGTTGTATATCAAGTTTATCCTAAGTCATTCCAAGACAGCAATGGCGATGGAATTGG GGATTTGCAAGGAATTATTTCAAGATTAGGTTACTTAGAAAAATTAGGGATTGATGCCATTTGGCTTTCACCAGTTTATC AATCACCTGGCGTCGACAATGGCTATGATATTTCAGATTATGAGGCTATTGATCCGCAATATGGCACGATGGCTGATATG GATGAACTGATTAAAAAGGCAAAAGAACATCATATTCGCATTGTTATGGATTTGGTAGTCAATCATACTTCAGATCAACA CAAGTGGTTTATTGAGTCTAGAAAGAGTAAAAATAATCCTTATCGTGACTATTATATTTGGCGTGATCCAGTTGATGGTC ATGAACCTAATGAATTAAAGTCAGCCTTTTCAGGGTCAGCTTGGAAATTTGATGGAAAAACAGGTCAATATTACTTACAC TTTTTTGCTGATCAACAGCCAGATTTAAATTGGAAGAATCCAGAATTGCGCCATAAGATCTACGACATGATGAATTTCTG GCTTAATAAGGGTATCGGCGGCTTCCGGATGGACGTGATCGAATTGATCGGTAAGGATCCCGACAAGATGATTCGTGAAA ATGGCCCAATGCTTCATCCATATTTGCAAGAAATGAACAAGAATACTTTTGACAAGCGTGATGTGATGACAGTTGGTGAA ACTTGGAATGCAACACCAAAGATTGCGGAAGAATATTCTGATCCTGCACGTCATGAATTATCGATGGTCTTCCAATTTGA AAATCAATCTTTAGACCAACAACCAGGTAAAGAAAAGTGGGATTTGCGTCCGCTCGATCTGGGCGAATTGAAGAAAGTTT TAGTTAAATGGCAAACTGAGATTGATTTTGACCATGCTTGGAACAGTTTATTCTGGGAAAACCATGATATTCCACGAGTA ATTTCTCGCTGGGGCAATGACAAAGAATATCGCGTACAATGTGCTAAGATGTTTGCCATCGTTTTGCACATGATGCACGG CACACCATACATCTTTAATGGTGAAGAAATCGGCATGACTAATTGTCCGGTAAAAGATATTAGTGAAGTAGAAGATATCG AAAGCATTAATATGTACAACGAGCGTTTAGCTGAAGGCAATGACAAAGATGAGCTGATTCATGCCATCAATGTTAAGGGC CGTGACAATGCTCGTCGTCCTATGCAATGGAATGATGATAAGAATGCCGGCTTTTCAGATGGTAGGCCATGGCTAGCAAC TAATTCTAACTATGTTGATATTAATGTAGAAAAAGCATTGGCTGATCCAGATTCAATTTTTTACACTTATCAAAAATTGA TTAAGTTGCGGCATGAAAATGATGTTGTGGTAAACGGTGATTTCGAATTGATTCCTGATACAGGGGATGCAGTCCTTGCA TACTACCGCGTATTAGGTGATGAAAAGTGGCTAGTAGTTGCCAACTTATCTGGTAGGGAGCAGAAGTTTAATTCAGCTGA TCAGATCGACCAAGTTTTGGTTGCTAACTATGACGAAAGAAATGATTTAAACGATATTACTCTTAAGCCATATGAAGCTT TTGCCTGCAAAATAATTAAGTAG Protein sequence : MTPWWKKAVVYQVYPKSFQDSNGDGIGDLQGIISRLGYLEKLGIDAIWLSPVYQSPGVDNGYDISDYEAIDPQYGTMADM DELIKKAKEHHIRIVMDLVVNHTSDQHKWFIESRKSKNNPYRDYYIWRDPVDGHEPNELKSAFSGSAWKFDGKTGQYYLH FFADQQPDLNWKNPELRHKIYDMMNFWLNKGIGGFRMDVIELIGKDPDKMIRENGPMLHPYLQEMNKNTFDKRDVMTVGE TWNATPKIAEEYSDPARHELSMVFQFENQSLDQQPGKEKWDLRPLDLGELKKVLVKWQTEIDFDHAWNSLFWENHDIPRV ISRWGNDKEYRVQCAKMFAIVLHMMHGTPYIFNGEEIGMTNCPVKDISEVEDIESINMYNERLAEGNDKDELIHAINVKG RDNARRPMQWNDDKNAGFSDGRPWLATNSNYVDINVEKALADPDSIFYTYQKLIKLRHENDVVVNGDFELIPDTGDAVLA YYRVLGDEKWLVVANLSGREQKFNSADQIDQVLVANYDERNDLNDITLKPYEAFACKIIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 4e-132 | 51 |
