Gene Information

Name : LAB52_09060 (LAB52_09060)
Accession : YP_005854725.1
Strain : Lactobacillus amylovorus GRL1118
Genome accession: NC_017470
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1760855 - 1761529 bp
Length : 675 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence :

ATGGCAGTAATTGAATTAAAAGACGTAAAGAAAGTTTATGGTAAAGGCGACGCGCAAGTTGTTGCTTTAAAAGATATTAA
CTTTAAGGCAGATAAAGGCGAAGTTGTTTTAATTATGGGACCTTCCGGTGCTGGTAAGAGTACTTTTTTGACGATTGCAG
GTTCATTGCAAAAGCCAACTTCAGGCGAAGTCTTGATTAACGATGAAGATATCAGCGATTTTTCCGCCAAAAAGCGTAAT
GAATTGCGTTTGAACAAAATCGGTTTTGTTTTGCAAGCTTACAACCTAGTACCATTTTTGACAGTGAATGAGCAATTTAC
TTTAGTTGATAAGGTAAAAAAGCAAAATAATATCTCACGAGAAGAATTGCAAGATCTGCTTAAGCAATTAGGTATTACAG
ATTTGGTCAAGAAATACCCCAGTGAATTATCAGGTGGTCAGCAGCAACGTGCCGCTATTGCGCGTGCGCTTTACGCTAAT
CCAGAAATCCTGCTAGCAGATGAACCTACTGCTTCGCTTGATACGAAGAATGTCGAAGAGGTAGGACAATTGTTCAAGGA
TCTCGCAAAAAAGCGTGACAAGGTCGTTATGCTCGTTACACACGATCCTCGACTTGAGAAGTATGCCGATCACATCTATG
AAATGATGGATGGGCAAATGACCCAGAAAAAATAG

Protein sequence :

MAVIELKDVKKVYGKGDAQVVALKDINFKADKGEVVLIMGPSGAGKSTFLTIAGSLQKPTSGEVLINDEDISDFSAKKRN
ELRLNKIGFVLQAYNLVPFLTVNEQFTLVDKVKKQNNISREELQDLLKQLGITDLVKKYPSELSGGQQQRAAIARALYAN
PEILLADEPTASLDTKNVEEVGQLFKDLAKKRDKVVMLVTHDPRLEKYADHIYEMMDGQMTQKK

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAP55232.1	unknown	Not tested	SaPIbov2	Protein	3e-43	50
SARLGA251_00480	YP_005754062.1	ABC-type transport system ATPase	Not tested	Type-XI SCCmec	Protein	6e-38	47

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
LAB52_09060	YP_005854725.1	ABC transporter ATP-binding protein	CP001581.1.gene798.p	Protein	5e-31	42