Gene Information

Name : LAB52_08610 (LAB52_08610)
Accession : YP_005854641.1
Strain : Lactobacillus amylovorus GRL1118
Genome accession: NC_017470
Putative virulence/resistance : Unknown
Product : transposase ORF_A
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1682770 - 1683117 bp
Length : 348 bp
Strand : +
Note : COG3436 Transposase and inactivated derivatives

DNA sequence :
ATGATTAGGCTCAGTGATTTGGGTCAAGTCTATATTGTTTGTGGCAAGACGGATCTGCGTAAAGGCATTGATGGCCTAGC
AACTTTAGTTAAAGAACAGTTTGAACTTGATCCTTTTAGTGGTAAAGTTTTCCTCTTTTGCGGCGGAAGCAAGGACCGCT
TCAAAGCCCTTTATTGGGATGGGCAAGGCTTCTGGCTGTTATACAAAAGATTTGAGAACGGAAAATTGAACTGGCCTCGA
AATCAAAATGAAGTTCAAGCTTTATCTTCTAAGCAGGTCGACTGGCTAATGAAGGGCTTTGCAATTACCCCTAAAATAAA
GAACACGAAAGCGCGCGAATTCTACTAA

Protein sequence :
MIRLSDLGQVYIVCGKTDLRKGIDGLATLVKEQFELDPFSGKVFLFCGGSKDRFKALYWDGQGFWLLYKRFENGKLNWPR
NQNEVQALSSKQVDWLMKGFAITPKIKNTKAREFY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 2e-08 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LAB52_08610 YP_005854641.1 transposase ORF_A VFG1517 Protein 7e-09 42