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Name : LAB52_08145 (LAB52_08145) Accession : YP_005854551.1 Strain : Lactobacillus amylovorus GRL1118 Genome accession: NC_017470 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 1595031 - 1596338 bp Length : 1308 bp Strand : - Note : COG0172 Seryl-tRNA synthetase DNA sequence : ATGCTTGATATTAAAGTGATTCGTGAGAATCTTGATTGGTCAAAGAAGAAGCTTGCTACACGTGGCATTAAGCCAGAAGA ATTGGACGAATTAGTTGAAATCGACACTAAGCGTCGTAAGGATTTGACTAAGAGTGAACAATTAAAGGCTAAGCGTAACG ATGTTTCAAAGCAAATTGCTGAAAAGAAGCGTAACAAGGAAGACGCTAGCGATGCCATAGCTGCTATGCGTGAAGTAGGT AAGGAAATCAAGGACTTAGATAAAGAAGTTGATGAATTAACTGAAAAACAAAACTACATTTTGCTTAGATTGCCTAACTT CCCAGCAGACTCAGACCCAGTTGGACCAGACGACAGCTACAACGAAGAAGTTCGTAAGTGGGAAGAACCAACTAAGTTTG ACTTTAAGCCAAAGGCTCACTGGGACATCGGTACTGATTTGGGTATTTTGGACTGGGACCGTGCTGCTAAGGTTTCAGGT GCACGTTTTGTTTACTACATTGGTGCAGGTGCACTTTTGGAACGTGCCGTATTCAACTTCTTCCTTGATGAAAACACCAA GGATGGCTACACCGAAGTTATCCCACCTTACTTGGTAAACGATGCTTCAATGCAAGGTACTGGTCAATTCCCTAAGTTCC ACGAAGACGTTTATACTATCGTTGATAACGACGATCCAGATAAGCCACGTGACTTAACTTTGATTCCAACTGCCGAAGTT CCTTTGGTAAACTACTTCAGAAATGAAATTATCCACGGCGACAAGCTCCCAATTAACGTAACTGCTTTATCACCAGCATT CAGAAGTGAAGCAGGTTCAGCTGGTCGTGATACTCGTGGTTTAATTAGAATGCACGAATTCCGTAAGGTTGAAATGGTTA AGGTATGTAAGCCAGACGAATCATGGGATGAACTTGAAAAGTTGACTCACAACGCAGAACACTTATTGCAAAAGTTAGGC TTGCCATACCACGTAGTTGCTTTGTCAACTGGGGATGCAAGTTTCACTAGTGCTAAGACTTACGACCTTGAAGTTTGGAT GCCTGCACAAGACAAGTACCGTGAAATTTCAAGTTGTTCAAACTGTACTGACTTCCAAGCACGTCGCGCACAAATTCGTT ACCGTGACGAAGACGGCAAGCTTCACTTGGCTCACACTTTGAACGGTTCAGGTTTGGCAGTTGGTCGTTGTGTAGCCGCA ATTTTGGAAAACTACCAAAACGAAGACGGTTCAGTAACTGTTCCAGATGTACTTGTTCCATACATGAACGGTATGAAGAA GATCACTAAGGAATCAAGTTTAATCTAA Protein sequence : MLDIKVIRENLDWSKKKLATRGIKPEELDELVEIDTKRRKDLTKSEQLKAKRNDVSKQIAEKKRNKEDASDAIAAMREVG KEIKDLDKEVDELTEKQNYILLRLPNFPADSDPVGPDDSYNEEVRKWEEPTKFDFKPKAHWDIGTDLGILDWDRAAKVSG ARFVYYIGAGALLERAVFNFFLDENTKDGYTEVIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKPRDLTLIPTAEV PLVNYFRNEIIHGDKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVCKPDESWDELEKLTHNAEHLLQKLG LPYHVVALSTGDASFTSAKTYDLEVWMPAQDKYREISSCSNCTDFQARRAQIRYRDEDGKLHLAHTLNGSGLAVGRCVAA ILENYQNEDGSVTVPDVLVPYMNGMKKITKESSLI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-131 | 65 |
