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Name : LAB52_07810 (LAB52_07810) Accession : YP_005854486.1 Strain : Lactobacillus amylovorus GRL1118 Genome accession: NC_017470 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : - COG ID : - EC number : - Position : 1521117 - 1523777 bp Length : 2661 bp Strand : - Note : COG0258 5'-3' exonuclease (including N-terminal domain of PolI) DNA sequence : ATGGCAGATAAAAAATTACTTCTAATCGATGGTAACTCTGTAGCTTTCAGAGCCTTTTACGCTCTTTATCGTCAACTAGA ATCTTTCAAGAGTCCGGACGGCCTGCACACTAATGCCATTTACGCTTTTAAGAACATGCTCGATGTCCTTTTAAAAGACG TTGATCCAACCCACGTATTGGTAGCTTTTGATGCAGGAAAAGTCACTTTTAGAACAAAAATGTATGGGGAATATAAAGGT GGACGTGCTAAAACTCCAGAAGAGTTGCTCGAACAAATGCCTTATATTCAAGAAATGCTTCATGACTTAGGTATTAAAAC TTATGAATTGAAGAATTATGAAGCAGATGACATCATTGGTACTTTTGCTGCGAAGGGTGAAAAGACCGGGTTCACAACCA CGATCGTAACTGGTGACCGCGACTTGACCCAACTTGCGTCCGACAAGACGACTGTCGAAGTAACTAAATCTGGTGTTTCT CAACTTGAAGCTTATACACCAGAACATATGAAGGAAGTTAATGGGGTAACTCCAACCGAATTCATCGACATGAAGGCTTT GATGGGTGATAGTTCAGATAATTATCCAGGTGTTACAAAAGTTGGCCCTAAAACTGCATCACGTTTGATTCAAAAATACG GTTCCGTTGAAGGGATTTACGATCATATCGACGAAATGAAGAAGTCCAAGTTAAAGGAAAATTTGATCAACGATAAAGAC AAGGCCTTTTTAGCTAAGAAACTTGCCACGATTGACCGTGATTCACCGGTAACTCTAGATATCGATGATATAAAACGTCA GCCAGTTGATTATGAAAAGCTGCGTCAATTCTATGAAAAGATGAACTTCCGTAAGTTCTTAGCTGACCTAAATGCTTCAG GTGCTGGTCAAGATAGTACTGAAGTTGAAAAAGTAGAATACATCGTTTTAAACGACAACGTTAAGGATGTTAAGGCTACT GAAGATGACACCATTGAGTTTTACTTAGAAATGCTCGGTGCTAACTATCACTTAGCTCCTTTTGTTGGCTTCAGCTTGAA GATTAACGACAAGATCTACGTTTCAAGAGACGTTGAATTGCTTGAAGAAGATAATATCAAGCACATCTTAGAAGACGAAA AGATTAAGAAGAATGTCTTTGACCTGAAGAGAACAATGGTTGCTGCACATCGTTTGGGCATTCACACTCACGGTCTTGAT TACGACATGCTTTTGGCATCTTACTTGATTAATAATGAAAATAACTCCAACGATCTTGGTGAAATTGCCCATCTTTATGG GGATTATTCCGTTAAGACCGACCTTGAAGTCTACGGCAAAGGTAAGAGTGAACACATCCCTGATGACGATGATGAATTAT TCAACCACTTAGCTTCCAAGGTCAACGCCATTGAAAAACTTAAGCGGGAGCTTCTTAAAAAGCTTAAAGAACACGAACAG GATGCTTTGTTTGACACAATCGAAATCCCAACTGCGTGCGTTTTAGCCAGAATGGAAATGAACGGGATGAAGGTTGAAGC CAGCACCTTGATTCAACTGCAAAATGAATTTGCCGTTAAATTGAAGGAACTCGAAGACAAGATTTATGGCCAAGCCGGTG AAAAGTTCAACTTGAACTCACCAAAGCAATTAGGTCACATTTTGTTTGAAAAGCTTGGTTTGCCAGTCATCAAGAAGACC AAGACTGGTTATTCAACTTCAGTTGAAGTACTTGATCAATTGAAGACGCAAAGCCCAATCGTTAGCGAAATTTTGGACTA TCGTCAAATTGCCAAGATTCAATCTACCTATGTAAAGGGTCTGCTTGACGTCATTCAACCAGATGGCCGCGTGCACACAC GTTACTTGCAGACTTTGACTGCAACTGGTCGACTTTCTAGTGTGGATCCTAACTTGCAAAATATCCCTACCCGTACCGAA GAAGGAAAGCAAATCAGAAAAGCTTTCGTGCCAAGTGAACCAGACGGCTACATTTTCTCTTGCGACTATTCACAAGTTGA ACTTCGTGTTTTAGCTCACGTTTCTGGCGATCAAAACATGCAAGAGGCCTTCAAGACCGGATACGATATTCACTCACACA CCGCGATGAAGATTTTCCACTTGGATTCACCAGATCAAGTAACGCCACTGATGCGTCGCCACGCTAAAGCCGTTAACTTC GGTATTGTTTACGGTATTTCTGATTACGGTTTGTCCAAGAACTTAGGTATTTCTAGAAAACGTGCCCAAGAATTTATCGA CAACTACTTCGAACAATATCCTCAAATCAAGGATTACATGGATAAGGCTGTGCAAGAAGCGCGTGACAAAGGCTATGCCG AAACAATTATGCACCGTCGCAGATACTTGCCAGATATTCACGCTAAGAAGTACACCGTGCGTGCCTTTGCTGAAAGAACC GCCATCAACTCACCAATCCAAGGTTCAGCTGCCGATATCATCAAGATTGCCATGATTAACATGCAAAAGAAGCTTGATGA ATTGCACCTCAAGACCAAGATGGTGGTTCAGGTGCACGACGAATTGATTTTTGACGTACCAAAAGATGAACTTGAAACAA TCAAGAAGATTGTGCCAGAAGTAATGCAATCAGCAGTTAAGCTTGATGTGCCACTAATTGCTGATTCTGGTTGGGGCCAC AATTGGTACGATGCAAAGTAG Protein sequence : MADKKLLLIDGNSVAFRAFYALYRQLESFKSPDGLHTNAIYAFKNMLDVLLKDVDPTHVLVAFDAGKVTFRTKMYGEYKG GRAKTPEELLEQMPYIQEMLHDLGIKTYELKNYEADDIIGTFAAKGEKTGFTTTIVTGDRDLTQLASDKTTVEVTKSGVS QLEAYTPEHMKEVNGVTPTEFIDMKALMGDSSDNYPGVTKVGPKTASRLIQKYGSVEGIYDHIDEMKKSKLKENLINDKD KAFLAKKLATIDRDSPVTLDIDDIKRQPVDYEKLRQFYEKMNFRKFLADLNASGAGQDSTEVEKVEYIVLNDNVKDVKAT EDDTIEFYLEMLGANYHLAPFVGFSLKINDKIYVSRDVELLEEDNIKHILEDEKIKKNVFDLKRTMVAAHRLGIHTHGLD YDMLLASYLINNENNSNDLGEIAHLYGDYSVKTDLEVYGKGKSEHIPDDDDELFNHLASKVNAIEKLKRELLKKLKEHEQ DALFDTIEIPTACVLARMEMNGMKVEASTLIQLQNEFAVKLKELEDKIYGQAGEKFNLNSPKQLGHILFEKLGLPVIKKT KTGYSTSVEVLDQLKTQSPIVSEILDYRQIAKIQSTYVKGLLDVIQPDGRVHTRYLQTLTATGRLSSVDPNLQNIPTRTE EGKQIRKAFVPSEPDGYIFSCDYSQVELRVLAHVSGDQNMQEAFKTGYDIHSHTAMKIFHLDSPDQVTPLMRRHAKAVNF GIVYGISDYGLSKNLGISRKRAQEFIDNYFEQYPQIKDYMDKAVQEARDKGYAETIMHRRRYLPDIHAKKYTVRAFAERT AINSPIQGSAADIIKIAMINMQKKLDELHLKTKMVVQVHDELIFDVPKDELETIKKIVPEVMQSAVKLDVPLIADSGWGH NWYDAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 0.0 | 55 |
