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Name : LAB52_06765 (LAB52_06765) Accession : YP_005854283.1 Strain : Lactobacillus amylovorus GRL1118 Genome accession: NC_017470 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : - COG ID : - EC number : - Position : 1326174 - 1327880 bp Length : 1707 bp Strand : + Note : COG3666 Transposase and inactivated derivatives DNA sequence : ATGTATCAAAATTATATCACAGGACAAACTACTTTATCATTAAATTTAGATTTTTCTATCCCTGCAAATCACATTGCCAG TGTTATCAGTGAATTCGTTGATTCTATTCCTAACGAAGTTATCTTAGAAACCACTTCTAATACAGGCAGACCTGCATATC ACCCGGCAATGATGCTTAAGATTTTACTCTTTGCTTATTCTAGAAGAGTTTTTTCAGGCAGAAAAATTGAAAGAATGCTA GAAGAGAATCTGCCCATGATGATTTTGGCTGACAATAGAAAGATTTCTTATCACACGATCAATAATTTCAGATCAAGCGA CCATGCCAATAAGGTAATTAAGCAGTGCTTTGTCTACTTTACTTCATTATTAGAAGATGAGGGATTAATCCGTGAAAATG CAGTTTTTATCGATGGTACTAAGATTGAAGCGGACGCCAACAGGTACACTTTTGTCTGGCGAAAAGCTATTGAGAAGTAT CATGCCAAGTTAAAGGAAGACGTGTCTGCTTTATATGAAGAACTGATCAATAAAGAAGTAGTCAAGGCCATGGCCAAAGA AGAAGCCCAAACTAGTCAAGGCTTAGAGATTCTGGCTCAAGAAACGGAAAAAGAAGTTGAGAAGCTGACCGAGAAAATTG ATCGAGAACCTAAAGCCATTCCAGGCGGATCAAAAAATAAGGCCAAGCGCCGTGAATTAAAGAAGATCGCACATAAACTC AGAAAAGATTTTATTCCGCGTGCTAAAAAGTACGAAGAAGCTGAAGAGATCTTTGCTGGCCGTAACAGCTACTCTAAAAC AGATCATGATGCCACCTTCATGCATATGAAAGAAGATCATATGAAAAATGGGCAGCTAAAGCCAGGCTACAATATTCAGG CAGCGACTACTAATCAATACATAGTTGATTTTGCCCCGTTTCCTAATCCGACTGACTTTAGAACATTCGAACCATTTCTA GACCAAATGAAGTCCAGAGGAATTCTCGATAAGTTTCAAAATATTGTGGCCGATGCGGGCTATGGCAGTGAATACAATTA CTCGATTCTGGAAGAGAATTATTCAGATAAGAACTATCAGATTCCGTATACCCAATACGAAAAAGAACAAACGCGAAAAT ATAAGAAAGATCCATCAAAGGTCGACAACTGGTACTATAACGAAGAAGAAGACTATTACGTAGATAAATCAGGCGTCCGC TTCAACTTCAAATATTATAGTCAAAGAAAAGATCGATCTACTGGCATGGTCAGAAACTTCAAAATTTATGAAGCTGATGA GTTCCAGCTAACTGAAGAACTGACCCAATTGGCTAAAACCAAAACAGGTCGACAAAGACAGATTCACTACAATCCTAACT GGCAGTATTTAAAAGAAAAAGCAAAAGAGACTCTTCAAAGCGAAGAAGGCAAACGCATCTATGGCTGTCGCAAGTCAGAT GTGGAGCCAATTTTTGGGCACATGAAGAGTGTATTTGGTATGCGCAGAACGCATTTAAGAGGCAAAAAGAAAGTCGAAAC GGATGTCGGTATCATGTTCATGACGATGAATCTGAAAAAATATGGAGCCAACAAGAAGGTAAAGCCTTCGAATTTTCATT TCAAAAACAAAAAACACAGGAATTCACTAAAAATAATGAATTGCTGTGTTTTTATATCCGGGCTAAAAATCGAGTTTTTT CCCAGACACTTTTCTTTTATTTCATAA Protein sequence : MYQNYITGQTTLSLNLDFSIPANHIASVISEFVDSIPNEVILETTSNTGRPAYHPAMMLKILLFAYSRRVFSGRKIERML EENLPMMILADNRKISYHTINNFRSSDHANKVIKQCFVYFTSLLEDEGLIRENAVFIDGTKIEADANRYTFVWRKAIEKY HAKLKEDVSALYEELINKEVVKAMAKEEAQTSQGLEILAQETEKEVEKLTEKIDREPKAIPGGSKNKAKRRELKKIAHKL RKDFIPRAKKYEEAEEIFAGRNSYSKTDHDATFMHMKEDHMKNGQLKPGYNIQAATTNQYIVDFAPFPNPTDFRTFEPFL DQMKSRGILDKFQNIVADAGYGSEYNYSILEENYSDKNYQIPYTQYEKEQTRKYKKDPSKVDNWYYNEEEDYYVDKSGVR FNFKYYSQRKDRSTGMVRNFKIYEADEFQLTEELTQLAKTKTGRQRQIHYNPNWQYLKEKAKETLQSEEGKRIYGCRKSD VEPIFGHMKSVFGMRRTHLRGKKKVETDVGIMFMTMNLKKYGANKKVKPSNFHFKNKKHRNSLKIMNCCVFISGLKIEFF PRHFSFIS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp | YP_254534.1 | IS1272 transposase | Not tested | ¥ðSh2 | Protein | 1e-66 | 42 |
| SAMSHR1132_00350 | YP_005324559.1 | putative transposase | Not tested | Type-IIIinv SCCmec | Protein | 1e-70 | 42 |
| MW0034 | NP_644849.1 | hypothetical protein | Not tested | Type-IV SCCmec | Protein | 1e-70 | 42 |
| unnamed | BAA86649.1 | hypothetical protein | Not tested | Type-I SCCmec | Protein | 8e-71 | 42 |
| SACOL0036 | YP_184947.1 | IS1272 transposase | Not tested | Type-I SCCmec | Protein | 1e-70 | 42 |
| SAUSA300_0034 | YP_492755.1 | IS1272, transposase | Not tested | Type-IV SCCmec | Protein | 4e-68 | 41 |
