Gene Information

Name : LAB52_06320 (LAB52_06320)
Accession : YP_005854198.1
Strain : Lactobacillus amylovorus GRL1118
Genome accession: NC_017470
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : 2.1.3.3
Position : 1228308 - 1229348 bp
Length : 1041 bp
Strand : -
Note : COG0078 Ornithine carbamoyltransferase

DNA sequence :
ATGAAATATTTACAAAACGTTTTTCAAGGTAGAAGCTTTTTAGATTGTAAGGATTATACTCCTGCAGAAATTGAATATTT
AATTGATTTTGCACTTCACTTAAAAGAATTAAAGAAAGAGCATATTCCACACGAGTATTTAAAGGGTAAGAATATTGCGC
TTTTGTTTGAAAAGTCTTCAACTAGAACTCGTTCCGCCTTTGTCGTTGCTTGCAACGATTTAGGAGCAAATCCTGAGTAT
ATGGGTGCAGGTGAAATTCACTTAGGCAAAAAAGAGAGTATTAAGGATACTGCTAAAGTTCTAGGCAGCATGTTTGATGG
GATTGAATATCGAGGCTTTGCCCAAAAAGATGTCGAAGATTTAGCTAAATACTCCGGTGTACCAGTTTGGAATGGTTTAA
CCGATAAGTGGCACCCAACGCAAATGCTAGCTGACTTTATGACAATTAAAGAAAAATTTGGTCACTTAAAGGGCATCACC
TTAGCTTATGTTGGCGACGGTCGTGATAATGTCGCAGACAGTCTATTAGTTGCCGGCAGCATGCTAGGAGTTAATGTGCA
TATTGTTACACCTAAGCCATTATTTACCCACCAAGATGTTCAAGAAATTGCCGAAAAATTTGCGAAAGATTCAGGCTCAC
AAAACATGATCACTGATGATATTGAAAAAGGCGTTAAAGGCGCCAACGTAATTTATACCGATGTCTGGGTTTCAATGGGT
GAAAACGACTGGAGCGAGAGAATCAAGCTCTTAAAGCCATACACTGTAAATATGAAGATGATGAAAGAAACTGGTACGCC
TGATGATCAATTAATCTTTATGCACTGTTTGCCAGCATTCCATGATCGCTCAACTAAGGTCGGTGAAGAAATCTACGAAA
AATATGGCTTAAGCGAGATGGAAGTTACCGATGAAGTCTTTAACTCCAAGTATGCTTGGCAATTTACTGAAGCTGAAAAT
AGATTGCACTCAATTAAAGCAGTAATGGCTGCAACTTTAGGTAATTTGTTTATTCCGACGGTTAACGAAAGAGGCAATTA
A

Protein sequence :
MKYLQNVFQGRSFLDCKDYTPAEIEYLIDFALHLKELKKEHIPHEYLKGKNIALLFEKSSTRTRSAFVVACNDLGANPEY
MGAGEIHLGKKESIKDTAKVLGSMFDGIEYRGFAQKDVEDLAKYSGVPVWNGLTDKWHPTQMLADFMTIKEKFGHLKGIT
LAYVGDGRDNVADSLLVAGSMLGVNVHIVTPKPLFTHQDVQEIAEKFAKDSGSQNMITDDIEKGVKGANVIYTDVWVSMG
ENDWSERIKLLKPYTVNMKMMKETGTPDDQLIFMHCLPAFHDRSTKVGEEIYEKYGLSEMEVTDEVFNSKYAWQFTEAEN
RLHSIKAVMAATLGNLFIPTVNERGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-85 56
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-85 56
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 8e-86 56
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 8e-86 56
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 6e-86 56
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 1e-83 56
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-85 56