Gene Information

Name : LBU_1628 (LBU_1628)
Accession : YP_005852837.1
Strain : Lactobacillus delbrueckii 2038
Genome accession: NC_017469
Putative virulence/resistance : Virulence
Product : EpsC protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1691470 - 1692237 bp
Length : 768 bp
Strand : -
Note : -

DNA sequence :
ATGGCATTCGGTCGAAAGAAGCATTTAAACAACGATACGATGAAGAACGGGGTCAAGCTGATTACTTTGGCCAACCCGCA
AAGCGTTATTTCAGAACAGTTCAGAAACATCCGAACCAATATCAATTTTATGAACGTTGATAGGGAAGTAAAGACGATTG
TCTTTACTTCAGCCATGGCCAGCGCCGGCAAGTCGACTGTCAGTGCTAATGTAGCCATTACCATGGCGCAAGCCGGCAAG
AAGACGATCTTGGTCGATGCGGACTTGCGCCGGCCAACTATGCACTCTACTTTTAACGTATCTAATAGCAATGGCTTGAC
AACTTTGTTGACTAGCCGGTCTATGGAAATGGACGCAAATAGCGTGATCCGGGAAAGTGGTGTAGAGAACCTGTCAATCT
TGACGGCAGGTCCGATTCCGCCAAACCCATCAGAACTTCTGTCTTCCAAGCATATGTTGGATTTGATTGAAGATTTAAAG
CAAGAATATGATATGGTCGTGCTTGACTTAGCACCGATCTTGGACGCGGGCGAAACCCAGCAACTGACCAGTTCTTTGGA
CGGGACGATCTTGGTTGTGCGCCAGGCACATTCACAGAAGTCAGCAGTTAAGCGGGCAGTTGAGCTGCTTAAGCTGACTA
AGTCACCAATCTTGGGTTATGTTATGAACGATGTTGATGCCGATGGGGATGACGGCTATGGATATGGTTATGGCTACGGT
TATGGCGAAGAAGATGAGAAGAAGGGGCTCTTTGGGAGAAAGAAGTAG

Protein sequence :
MAFGRKKHLNNDTMKNGVKLITLANPQSVISEQFRNIRTNINFMNVDREVKTIVFTSAMASAGKSTVSANVAITMAQAGK
KTILVDADLRRPTMHSTFNVSNSNGLTTLLTSRSMEMDANSVIRESGVENLSILTAGPIPPNPSELLSSKHMLDLIEDLK
QEYDMVVLDLAPILDAGETQQLTSSLDGTILVVRQAHSQKSAVKRAVELLKLTKSPILGYVMNDVDADGDDGYGYGYGYG
YGEEDEKKGLFGRKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0061 YP_300151.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 2e-35 42
cap1B AAA64641.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 3e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LBU_1628 YP_005852837.1 EpsC protein VFG1298 Protein 3e-35 42