Gene Information

Name : LBU_1048 (LBU_1048)
Accession : YP_005852257.1
Strain : Lactobacillus delbrueckii 2038
Genome accession: NC_017469
Putative virulence/resistance : Unknown
Product : HsdM
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1083505 - 1084635 bp
Length : 1131 bp
Strand : -
Note : -

DNA sequence :
ATGGCAACCAAAAGTAAAGAACTGAATTTTGAAGATAAGTTATGGAAAGCTGCTGATGCGCTTCGTGGGAATATGGATGC
GTCAGAGTACAGAAACGTTGTACTCGGCTTAATCTTTTTGAAGTACGTATCCGATGCCTTTGAAGAAAAGCACCAAGAAT
TGCTTAAGTCTGATTTCCCAGAGGATGCTGAGGATAGGGATGCATATGAAGCGGAAAATATTTTCTGGATCCCGAAGCAA
GCTCGGTGGGAAAATATCGCAGGTGCCTCAAAGACTCAGCAAATTGGCGAAGTTATCGATCAAGCCATGGAAGCAATCGA
AAAAGAAAACCCAAGCATTCAGGGTATTTTGAGTAAGAACTATGAATCTCCTGATTTAGATAAGAGTCGCTTGGGTAAAG
TGGTTGACTTGATCTCGGACATTGATGTCGGTAGTAAGGAATCCCAAGATCGGGATGTCTTGGGTAGAGTTTACGAATAC
TTCTTGCAACAGTTTGCTTCAGCTGAAGGTAGGGGTGGCGGTGAATTCTATACTCCTCGCTCTATCGTTAAAACTTTAGT
AGAAATGATTGAGCCTTATAAAGGGCGTGTCTATGACCCATGCTGTGGTTCAGGTGGGATGTTTGTTCAGTCAGAAGAAT
TCGTAAAAGAACACCAAGGCAGAATTGACGATTTGGCTGTTTATGGTGAAGAATCAAACCCGACAACTTGGAAATTGGCT
AAGATGAACTTGGCGATTAGAGGTATTGACAACGACTTGGGGCCTCACCAAGGTGATACCTTTGCCAATGACATGCACAA
AGGAACCCATTTCGATTACATTCTTGCAAATCCACCGTTCAACATTAAGGACTGGGGCGGTGAAAAGCTTAAGGATGATG
CACGTTGGAAGTATGGGGTTCCGCCGGAAAGCAACGCAAACTATGCTTGGATGGAGCACATCATTAGTAAGCTGCAACCA
GATGGTAAAGCAGGTTTTGTTTTGGCAAACGGCGCACTTTCGACTTCTCGTAAAGAAGAATTAGCAATTAGAAAAGCAGT
TCTTGAAGATGACAAGATTGATGCAATCGTAGCCTTGCCTGGTGCAAATGTTCTATTCAACACAGATCCCTGTTTCTCTT
TGGTTCATTGA

Protein sequence :
MATKSKELNFEDKLWKAADALRGNMDASEYRNVVLGLIFLKYVSDAFEEKHQELLKSDFPEDAEDRDAYEAENIFWIPKQ
ARWENIAGASKTQQIGEVIDQAMEAIEKENPSIQGILSKNYESPDLDKSRLGKVVDLISDIDVGSKESQDRDVLGRVYEY
FLQQFASAEGRGGGEFYTPRSIVKTLVEMIEPYKGRVYDPCCGSGGMFVQSEEFVKEHQGRIDDLAVYGEESNPTTWKLA
KMNLAIRGIDNDLGPHQGDTFANDMHKGTHFDYILANPPFNIKDWGGEKLKDDARWKYGVPPESNANYAWMEHIISKLQP
DGKAGFVLANGALSTSRKEELAIRKAVLEDDKIDAIVALPGANVLFNTDPCFSLVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hsdM BAD24842.1 HsdM protein Not tested Type-V SCCmec Protein 4e-115 64
hsdM YP_251979.1 type I restriction-modification system DNA methylase Not tested SCCmec Protein 9e-115 64
hsdM BAH57701.1 type I restriction-modification system DNA methylase Not tested Type-VII SCCmec Protein 2e-115 64
api49 CAF28523.1 putative HsdM-like N-methyl transferase Not tested YAPI Protein 1e-75 43