Gene Information

Name : LBU_1022 (LBU_1022)
Accession : YP_005852231.1
Strain : Lactobacillus delbrueckii 2038
Genome accession: NC_017469
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1052518 - 1053567 bp
Length : 1050 bp
Strand : -
Note : -

DNA sequence :
ATGGATCATTCATATTCTAACACTAAACCACACCAAAAGGGCAAGCACCTTAAGCTGAACGACCGGACTACAATCCAGGA
GCTGCACTCTAAGGGCTACTCTAATCGTGCTATAGCTAGAGAACTTAACTGCTCACCAAGCACGGTCGGATATGAGCTCA
AAAGAGGCACAGTATCCGTGTATACCGGCAATGTGAAGCGGTATAAAGCTGTCGAAGGGCAAAGCACTTACGAACCACAT
AGAAGCGAATGCGGCCGCAAGAGCTTGTTTCTTCGCAGACATAAGTTCATCGACTATGTTTCCCACTGCTTCCATAATCA
AGGCTGGTCTCTTGATGCTTGCGTGGGTTATGCTTTGGCCAAGGGAATCTTCCAGAAGGATCAGGTCGTATCAACCAAAA
CTCTGTATAACTACGTTGACTTGGGCCTAATGGATATCAAGAACGGTGATCTTCCAGAGAAGGTCAAGCGCAATACTAAG
ACTCATCGTGCCCGTGTAAACAAGCGTATCCTGGGACGAAGCATCGATGAACGTAGTCCTAGAATCGAAAACCGTAAGGA
CTTTGGTCACTGGGAATGCGATCTGGTTCTTGGACACAAGACTAAGGACGATGATGTGTTGCTTACTCTGTGCGAACGAA
AGACGCGTCAGTTCTTCATGATCAAGATTGAGGATAAGACCTCAGCTAGCGTTATGAAGGCATTTGATAAGCTTCGAGAG
TACTACGGATCCAAATGGAATCAAATCTTTAAGTCTATCACAACCGACAACGGATCTGAGTTCGCAGATTTATCCGATCT
TGAGCAAGTTTCCAAGACTCTTGTGTACTACGCTCATCCTTATACATCCTGTGATAAAGGCAGCGTAGAACGGCACAACG
GGCTTATCAGACGCTATATTCCCAAGGGAGACCGTATGGATAAGTACAGTGTGGAAGATATTGCTAAGATCGAGGTATGG
TGCAACTCTCTTCCTCGGAAGATCTTAAACTACAAGACTCCAGAAGAGTACTTTGACACCGAACTTGACCGCATTTACCG
GCGTAGATAG

Protein sequence :
MDHSYSNTKPHQKGKHLKLNDRTTIQELHSKGYSNRAIARELNCSPSTVGYELKRGTVSVYTGNVKRYKAVEGQSTYEPH
RSECGRKSLFLRRHKFIDYVSHCFHNQGWSLDACVGYALAKGIFQKDQVVSTKTLYNYVDLGLMDIKNGDLPEKVKRNTK
THRARVNKRILGRSIDERSPRIENRKDFGHWECDLVLGHKTKDDDVLLTLCERKTRQFFMIKIEDKTSASVMKAFDKLRE
YYGSKWNQIFKSITTDNGSEFADLSDLEQVSKTLVYYAHPYTSCDKGSVERHNGLIRRYIPKGDRMDKYSVEDIAKIEVW
CNSLPRKILNYKTPEEYFDTELDRIYRRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_1078 YP_698400.1 IS1470, transposase Not tested Not named Protein 4e-76 51
CPR_0379 YP_697708.1 IS1470, transposase Not tested Not named Protein 3e-76 51
CPR_0648 YP_697974.1 IS1470, transposase Not tested Not named Protein 2e-76 51
CPR_0383 YP_697712.1 IS1470, transposase Not tested Not named Protein 2e-76 51
CPR_0314 YP_697643.1 IS1470, transposase Not tested Not named Protein 2e-76 51
CPR_0967 YP_698290.1 IS1470, transposase Not tested Not named Protein 2e-76 51
CPR_1088 YP_698410.1 IS1470, transposase Not tested Not named Protein 1e-75 51
CPR_0321 YP_697650.1 IS1470, transposase Not tested Not named Protein 1e-75 51
CPR_0628 YP_697955.1 IS1470, transposase Not tested Not named Protein 5e-76 51
CPR_0659 YP_697986.1 IS1470, transposase Not tested Not named Protein 5e-50 47