Gene Information

Name : LBU_0943 (LBU_0943)
Accession : YP_005852152.1
Strain : Lactobacillus delbrueckii 2038
Genome accession: NC_017469
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 973220 - 973972 bp
Length : 753 bp
Strand : -
Note : -

DNA sequence : 
ATGGAAAAAGTGATGACTGTCAACAACGTTACAAAGACTTACGGTAAAAAAGGGGAGAAGCAGTTCCAGGCCTTAAAGGG
CGTCTCGCTCAGCGTAGCCAAGGGCGAATTCGTCGCCATTATGGGGACTTCCGGTTCTGGTAAGACCACTCTTTTGAACA
TCATGTCGACCTTGGACAAGCCAAGCAGCGGCGAGGTTACGATTAACGGCAAAAACGTCGCCAAGCTGAAGAAGAACCAG
ATGGCCGACTTCCGGGCTAAAGAAATTGGCTTTATCTTCCAGGACTTCAACCTCTTGGACAACCTGACCGCTAGGGAAAA
CATTGCTCTCCCTTTGTCTTTGCAAAGGGTCAAGAGCTCAGAAATCGATTCTAAGGTTGATAAGATCGCCGCTAAGCTCA
ACATCAGCGAAGTCTTGGAAAAGTACCCAGCAGCCATTTCCGGCGGGCAGAAGCAAAGAGTTGCTGCTGCCAGAGCCTTG
GTTCATGAACCGGCAATCTTGATGGCCGATGAACCAACAGGGGCCCTGGATTCTAAGTCTTCCAGGGCCTTGCTGGACAC
GATGGAGCTGCTTAATGAGAAAGACCAGGTTTCAATCTTGATGGTCACTCACGATCCGTTTTCTGCATCATTTGCTGACC
GGATTCTCTTTATCAGGGATGGCTTGATTGATGAAGAGATCAAGCGCGGGGACTTGAAGCGGCAGGACTTTTACAAGAAG
CTGATCAGCCAGCTCAGCGAAAATACCGACTAG

Protein sequence : 
MEKVMTVNNVTKTYGKKGEKQFQALKGVSLSVAKGEFVAIMGTSGSGKTTLLNIMSTLDKPSSGEVTINGKNVAKLKKNQ
MADFRAKEIGFIFQDFNLLDNLTARENIALPLSLQRVKSSEIDSKVDKIAAKLNISEVLEKYPAAISGGQKQRVAAARAL
VHEPAILMADEPTGALDSKSSRALLDTMELLNEKDQVSILMVTHDPFSASFADRILFIRDGLIDEEIKRGDLKRQDFYKK
LISQLSENTD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LBU_0943 YP_005852152.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-43 44
LBU_0943 YP_005852152.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-39 44
LBU_0943 YP_005852152.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 9e-38 43
LBU_0943 YP_005852152.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-35 42