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Name : treC (LBHH_0454) Accession : YP_005849668.1 Strain : Lactobacillus helveticus H10 Genome accession: NC_017467 Putative virulence/resistance : Unknown Product : Alpha,alpha-phosphotrehalase (GH13) Function : - COG functional category : - COG ID : - EC number : - Position : 479935 - 481608 bp Length : 1674 bp Strand : + Note : - DNA sequence : TTGAGATTAAGGAGGTGCGTGATGGGATTTCATAAAAAAGTCATTTATCAGCTGTATCCCAAGTCATTTTATGACAGCAA TGGCGACGGGGTCGGTGACTTGCGTGGCATTATTGAAAAGATTGATTATCTTAAGTCATTGCATGTCGACATGATCTGGT TCAATCCATTTTTCGTGTCACCGCAATACGATAACGGCTATGATGTTGCCGATTATCGCAATATTGATCCGCGTTTCGGC ACGATGGCGGATTTTGACGAATTGGCTAAGAAACTCAAAGAAGCTGGGATCGATATCATGTTGGACATGGTGTTGAATCA TACCAGCACGGAACATGAATGGTTCCAGAAGGCGTTGGCTGGCGACAAGCATTATCAAGCCTATTATTATATTCGCCCGC CAAAGCCGGATGGCAGCTTGCCGACTAACTGGGAAAGCAAATTCGGCGGACCAGCGTGGGCACCGTTTGGCGACACCGGC AATTATTATCTGCATTTATATGAACGCCGCCAAGCTGATTTGGATTGGCACAATCCAGCAGTTCGGCAAGAAGCCGCAGC GATTATTAACTTTTGGCGTGCCAAGGGTGTCCACGGATTTCGTTTCGATGTGTTGAATGTGATTGGCAAGGCAGAAAAAC TGGTTGATGCACCGCCAGAGGTTGCCAGCAAAACGCTGTACACGGATACGCCGATTGTTCAGGATTATCTGAAGGAACTG GCGGCTAATAGCTTCGGCCAGGATCAAAACAGTGTCACGGTGGGCGAAATGAGTTCCACAACTGTTAAGAACTCAATCGC CTACACAAAACCGGAAAATCATGAATTATCCATGGTCTTTCAATTTCACCATTTGAAGACGGATTATAAGAACGGTGAAA AGTGGACGAAAGAACCGTATAACTTCAATGCGTTGCGGGACATTTTGCACACTTGGGGTCAACAGTTAGATCAAGGCGGC GGCTGGCAGGCGCTGTTCTGGAATAACCACGATCAGCCGCGGGCACTCAATCGTTTTGGCAACGTTGACAAGTATCGGGT TAAAAGTGCCGAAATGCTTGCTGCGGCGATTCACCTCAGTCGTGGCACCCCGTATATCTATATGGGTGAGGAAATCGGCA TGACCGATCCGCACTACCATTCAATGGCTGATTATGTGGATATCGAAGCCAAGAATGCTTACAAGGCTTTGCTCAAGGAA GGTAAGTCGGAAAAAGCGGCGTTTGCCATCATTTTGGCGAAGGCCCGTGACAACAGTCGGACGCCGATGCAGTGGGATGA TTCGGCTAATGCCGGCTTTACCACCGGTACACCTTGGTTGCGATCGACGAATCAAAAAGAAATCAACGTCAAAGATGAGT TAGCGCATGGCGAAATTTTTCAATTTTATCAAAAGTTGATTGCGTTGCGAAAACAATATGACGTGATCAGTGACGGCAGT TATGAACCGTTTGGAATCGATATTGACCGCTTGTATGCGTACGAACGGGTTGCTGGTGAGGATCATTTGTTGGTCCTGAA TAACTTCAGTGACAAGGCGATCACAGTACTGCTGCCAAATCGATTCCAATCCGCAAAAGTGCTTATTACCAACGAATCAG GATTAATACCAACTGCAATGATGACATTGCCGCCGTACGCGACGATTGCATTGTTGACATCGGAAGAGAATTAA Protein sequence : MRLRRCVMGFHKKVIYQLYPKSFYDSNGDGVGDLRGIIEKIDYLKSLHVDMIWFNPFFVSPQYDNGYDVADYRNIDPRFG TMADFDELAKKLKEAGIDIMLDMVLNHTSTEHEWFQKALAGDKHYQAYYYIRPPKPDGSLPTNWESKFGGPAWAPFGDTG NYYLHLYERRQADLDWHNPAVRQEAAAIINFWRAKGVHGFRFDVLNVIGKAEKLVDAPPEVASKTLYTDTPIVQDYLKEL AANSFGQDQNSVTVGEMSSTTVKNSIAYTKPENHELSMVFQFHHLKTDYKNGEKWTKEPYNFNALRDILHTWGQQLDQGG GWQALFWNNHDQPRALNRFGNVDKYRVKSAEMLAAAIHLSRGTPYIYMGEEIGMTDPHYHSMADYVDIEAKNAYKALLKE GKSEKAAFAIILAKARDNSRTPMQWDDSANAGFTTGTPWLRSTNQKEINVKDELAHGEIFQFYQKLIALRKQYDVISDGS YEPFGIDIDRLYAYERVAGEDHLLVLNNFSDKAITVLLPNRFQSAKVLITNESGLIPTAMMTLPPYATIALLTSEEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 2e-99 | 42 |
