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Name : LBHH_0269 (LBHH_0269) Accession : YP_005849488.1 Strain : Lactobacillus helveticus H10 Genome accession: NC_017467 Putative virulence/resistance : Virulence Product : ATP-dependent clp protease ATP-binding subunit clpA-like protein Function : - COG functional category : - COG ID : - EC number : - Position : 289722 - 292190 bp Length : 2469 bp Strand : + Note : - DNA sequence : ATGGAAAATTCATATAGTAAAAGCGTTAATCAAGTGTTAGAAATTGCGCGTGAACAAGCACAGGAGTTTCATCATCGGCT AATTGGTACTGAGCATGTGTTATTGGCTATGGTGATTGAAACTGAAGGTGAAGCAGGAAAAATCTTGCGCTCATGGGGAT TGACGCCAACTGCCGTACGAGAAGAGATTGAACGTTACACAGGCTATGGTTCAGCAGCTAAGTCAAGCTACATGGAAATG TCACCTCGTTTAAGCTTAGCGTTAGATTATGCCAAAAGACAGGCTGACCAAGGTGGATATAAAGAAATTGAAACTAATCA TGTTTTGCTAGGAATAACTGCTAGTGAACAGGTTTTGTCAGCCATGATTTTAAAGAACTTAAATGTTGATATTGGCCGTT TGCGTCAAGATGTTAATGACAGCTTGGATCAAGAACAAGACTTTGGCGATTCAGCAAGCTGGTTAGGCAATAGCAATACC GCTACTGGCCAAAAGAAACGTAAAAATAGTACTACACCAACTCTAGATAAAGTAGCGGTTAATTTAAATCAACGCACCCG TGAAGGTGGAATTGATCCAGTTATTGGCCGTGAAAAAGAAATTAAGCGAGTTATTCAAATTTTATCTCGTCGTACTAAGA ACAATCCAATTTTGGTAGGCGAACCTGGTGTAGGTAAAACTGCGGTCGCCGAAGCAATTGCTACAGAAATTGTTAATAAA AAAGTTCCAGAAGGCTTGCTTGATAAGCGAGTAATGGCTCTTAACATGGGCAGTTTAGTAGCAGGCACTAAGTATCGTGG TGAATTTGAAGATAGAATGAAAAAGATTTTGGATGAAATTGCCAAAGACGGTAAAGTCATTCTATTTGTCGATGAAATGC ATACTTTGATTGGTGCTGGTGGTGCTGAAGGGGCAATTGATGCTTCTAATATTTTGAAACCTTCACTTGCGCGCGGCGAT ATTCAAATGATTGGTGCTACTACATTTGATGAATATCAAAAGTACATTGAAAAGGATCAAGCATTGGCTCGTCGTTTCCA ACAAGTACGTTTGAATGAACCTACTAAGAAGGATACGTTAGCTATTTTAAAGGGACTTAGACCTAAGTATGAAAAGTTCC ACCATGTGACTATTTCAGATGCTAGTCTTGAGGATGCTGTTGATTTATCTAGTCGGTACATTACTAATCGGTTCTTGCCA GATAAGGCGATTGATTTGGTAGATGAGGCTAGTGCAGCAGTTAAAATTAGAACTAATGTTGGTTCAAACAAAGATTTAGT TCAAATTAATGAAAAAATAAAGAATATTATTGAACAAAAGAATGAAGCAGCTGCGAGTCAGAACTTTGTTAAAGCAGCTC AACTTCAAGAAGCACAAAACAATTTGCAAATGCAGCGAGAAGAAATGGAGAATGCATTGCAAGTTAAGGTTAGTGCTGAG GCTGTTGTTGGCCCCGAAGATATTGCCAAGGTAGTATCTGACTGGACAGGTGTACCTGTTACTCAGATGAAGAGGGATGA AAGTCGCCAATTAGCTAACTTAGAGAGCATTTTGCATAAACGCGTGATTGGGCAAGATAAGGCTGTTTCAGCTGTAGCTC GTGCAATTCGTCGTAGCAGAAGCGGTATTAAGGATGAGCGCCGTCCAATTGGATCATTCTTGTTCTTAGGGCCAACAGGT GTAGGTAAGACTGAATTAGCTAAATCAGTTGCAGCAGCAATGTTTGGGTCAGAAGATCATTTGATCAGATTAGATATGTC TGAATATATGGATCAAATTGCCTCAAGCAAGTTAATTGGCTCAGCTCCTGGTTATGTTGGCTATGAAGAGGGCGGACAAC TTTCTGAACAAGTTCGTCGTCATCCATATTCAGTTGTTTTGCTTGATGAAGTGGAAAAAGCTCATCCTGATGTATTTAAT TTGCTTTTGCAAGTTTTGGATGAAGGATTTTTGACAGATTCTAAAGGCAGAAAAGTCGACTTTAGAAATACAATCATCAT TATGACTTCTAATTTGGGTTCACGTACGTTATTTGACAGCAAGGCTGTAGGTTTCAATGCTGATAAGTTTGACCAAGCTA AAGTAAGACAAGCTAAAGTTCAACAGGCAATTAAGCAATTCTTCCGTCCGGAATTTTTGAACCGAATTGATGAAACGATT ATCTTTGATGAATTAACTAAGAAGCAGTTGCGGGACATTGTAACTTTACTTACTCACAAGTTGGTAGTTCGTTTGCAAAA GAAGGGAATTACGCTTAGGATTTCCCGTGCCGCTTTGGATAAAATTGTTAAAGATGGTTATGACCCTGAAAATGGTGCTC GTCCACTTAGAAGAGCAATCCAAAATGATATCGAAGATAAATTAGCAGAAATGTTGATTACAGGTGAAGTAAAAGCAAAC GACACTTTGAAAATTGGTAGTCAACATGGTCATTTGAAATTTGATGTTGTGCCAGAAAAAAACTGGTGA Protein sequence : MENSYSKSVNQVLEIAREQAQEFHHRLIGTEHVLLAMVIETEGEAGKILRSWGLTPTAVREEIERYTGYGSAAKSSYMEM SPRLSLALDYAKRQADQGGYKEIETNHVLLGITASEQVLSAMILKNLNVDIGRLRQDVNDSLDQEQDFGDSASWLGNSNT ATGQKKRKNSTTPTLDKVAVNLNQRTREGGIDPVIGREKEIKRVIQILSRRTKNNPILVGEPGVGKTAVAEAIATEIVNK KVPEGLLDKRVMALNMGSLVAGTKYRGEFEDRMKKILDEIAKDGKVILFVDEMHTLIGAGGAEGAIDASNILKPSLARGD IQMIGATTFDEYQKYIEKDQALARRFQQVRLNEPTKKDTLAILKGLRPKYEKFHHVTISDASLEDAVDLSSRYITNRFLP DKAIDLVDEASAAVKIRTNVGSNKDLVQINEKIKNIIEQKNEAAASQNFVKAAQLQEAQNNLQMQREEMENALQVKVSAE AVVGPEDIAKVVSDWTGVPVTQMKRDESRQLANLESILHKRVIGQDKAVSAVARAIRRSRSGIKDERRPIGSFLFLGPTG VGKTELAKSVAAAMFGSEDHLIRLDMSEYMDQIASSKLIGSAPGYVGYEEGGQLSEQVRRHPYSVVLLDEVEKAHPDVFN LLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNLGSRTLFDSKAVGFNADKFDQAKVRQAKVQQAIKQFFRPEFLNRIDETI IFDELTKKQLRDIVTLLTHKLVVRLQKKGITLRISRAALDKIVKDGYDPENGARPLRRAIQNDIEDKLAEMLITGEVKAN DTLKIGSQHGHLKFDVVPEKNW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 6e-162 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LBHH_0269 | YP_005849488.1 | ATP-dependent clp protease ATP-binding subunit clpA-like protein | VFG0079 | Protein | 0.0 | 51 |
| LBHH_0269 | YP_005849488.1 | ATP-dependent clp protease ATP-binding subunit clpA-like protein | VFG0080 | Protein | 8e-134 | 49 |
