Gene Information

Name : LBHH_0244 (LBHH_0244)
Accession : YP_005849464.1
Strain : Lactobacillus helveticus H10
Genome accession: NC_017467
Putative virulence/resistance : Unknown
Product : Transposase IS1201
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 261607 - 262785 bp
Length : 1179 bp
Strand : +
Note : -

DNA sequence :
ATGAATGATTTTACCAAAAATATGGTTCAAGCTCTATTCAATCAAGACAAAATTAATGATTTATTGCGTAAAGAATTACA
ACAAGCAGTTAATGACTTGTTAGAAGCTGAATTAACTGCCTTTTTAGGTTATAATCCTTATGCAAGAGACGGCTGGAATA
CCGGCAATTCTAGGAACGGTGCCTACTTTCGCAAGGTGGATACGCAGTTTGGCAAAATTGAAATCCAGGTGCCACGAGAC
CGCAACGGCCTGTTTCATCAGCACACGCTGCCTGACTACAAGCAGCACTCCGATGTCTTGGAAAACATGATCATCAAGCT
TTACTCTAAAGGCGTAACTACCAGAGAGATAGCTGATTTGATTGAAAAAATGTATGGCAGCCATTACAGCCCCGCTCAAG
TATCCAATATTTCTAAGCAGATGATCCCCAAGGTAGAGGCCTATCACAAGCGTAAGCTGAGCGATAAGTTCTTCTGCGTT
TATCTAGACGCTGCCTACGTTCCTCTGCGCCGAGAAACTTTTGAACGTGAAGCTGTCTATATTGCCATTGGCATCAAACC
TAATGGCCACAAGGAAGTTATCGACTACTGCATTGCGCCCAATGAAAACATTGAAGTCTGGACGGAGCTGCTCCAAAGCA
TGAAGTCTCGCGGCTTAGAGCAAGTAGAGCTTTTTCTTTCAGATGGCGTTGTGGGCATGAAGACAGCACTGGCAAAGACC
TATCCTCAAGCTCATTTCCAGCGTTGCTTGGTTCATGTCATGCGTAATATCTGCGCTAAAGTACGCGTAGAGGATCGCGA
GGCAATTATGAACGAATTCAAGCAGATTCACCAGCAAGCCAATAAAGCAGCTGCTGTTGATGTATTGCATGCCTTCTATG
CCAAATGGGACAAGAGTTATAATCATGTCATAAGAAACCTGAAAGACATCGAGCCGGACCTGCTGGTCTTCTATAATTAT
CCTAAGCAGATCAGAGCTTCAATTTACTCTACCAACATGATTGAATCTTTTAACAACGTCATTAAGCGCAAGGCTAAGCC
TAAAGCAGAGTTTCCGACTGAACAGTCGCTTGATACTTTTATTGGCATCCAAGCAATGAGTTACAATGACCGCTACTTCA
ACCGAATTCACAAAGGCTTTGGTCAGGTTCAGGACACCTTAGAATCTTACTTTGATTAA

Protein sequence :
MNDFTKNMVQALFNQDKINDLLRKELQQAVNDLLEAELTAFLGYNPYARDGWNTGNSRNGAYFRKVDTQFGKIEIQVPRD
RNGLFHQHTLPDYKQHSDVLENMIIKLYSKGVTTREIADLIEKMYGSHYSPAQVSNISKQMIPKVEAYHKRKLSDKFFCV
YLDAAYVPLRRETFEREAVYIAIGIKPNGHKEVIDYCIAPNENIEVWTELLQSMKSRGLEQVELFLSDGVVGMKTALAKT
YPQAHFQRCLVHVMRNICAKVRVEDREAIMNEFKQIHQQANKAAAVDVLHAFYAKWDKSYNHVIRNLKDIEPDLLVFYNY
PKQIRASIYSTNMIESFNNVIKRKAKPKAEFPTEQSLDTFIGIQAMSYNDRYFNRIHKGFGQVQDTLESYFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAM21176.1 transposase Not tested Not named Protein 2e-102 51
unnamed AAM21184.1 transposase Not tested Not named Protein 2e-102 51
ef0057 AAM75262.1 EF0057 Not tested Not named Protein 2e-102 51
EF0595 NP_814357.1 ISEf1, transposase Not tested Not named Protein 4e-102 51