Gene Information

Name : LBHH_1855 (LBHH_1855)
Accession : YP_005851010.1
Strain : Lactobacillus helveticus H10
Genome accession: NC_017467
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1949938 - 1950642 bp
Length : 705 bp
Strand : -
Note : -

DNA sequence : 
TTGATCCTGCAAAGGCAATTGGTGAATAAAATGGCAGTAATTGAGTTGAAAAATGTAGAAAAAGTTTACGGTAAAGGCGA
TGCTCGAGTTGAAGCGTTAAAGGATATCAATTTTGAAGCCGATAAAAGCGAATTGGTTTTAATTATGGGACCGTCCGGTG
CAGGTAAAAGTACTTTTTTAACGATTGCCGGATCGCTGCAAAAACCAACTTCAGGCCAAGTTATCGTCAATGGGGAAGAT
ATCAGCAAGTTTTCTGATAAAAAAAGAAACAACTTACGTTTAAATGAAATTGGTTTTATTTTACAAGCTTATAATTTAGT
TCCATATCTGACTGTTCATGATCAATTTGTTTTGGTTGATAAAGTTAAAAAAGAAGGTAATTTGTCCAAAGAAGATTTAG
ACAAATTGCTCAAAGATTTGGGGATTACTAAATTAGTTAAAAAATATCCTAATGAATTGTCAGGCGGTCAGCAACAGCGT
GTGGCAATTGCACGTGCACTTTATGCTAATCCTGCAATTTTGCTGGCTGATGAGCCTACGGCATCTCTTGATACGCAAAA
CGTAGAAGAGGTTGGCAAGTTGTTTAAGAAACTTGCTAAAGAACGTGAAAAAGCAATTTTGATTGTCACCCACGATCCTC
GTCTTGAAAAATATGCGGATCATATTTATGAGATGATGGATGGAAAAATGAGTCAAAAGAAATAA

Protein sequence : 
MILQRQLVNKMAVIELKNVEKVYGKGDARVEALKDINFEADKSELVLIMGPSGAGKSTFLTIAGSLQKPTSGQVIVNGED
ISKFSDKKRNNLRLNEIGFILQAYNLVPYLTVHDQFVLVDKVKKEGNLSKEDLDKLLKDLGITKLVKKYPNELSGGQQQR
VAIARALYANPAILLADEPTASLDTQNVEEVGKLFKKLAKEREKAILIVTHDPRLEKYADHIYEMMDGKMSQKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 2e-44 51
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 4e-40 49
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-29 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LBHH_1855 YP_005851010.1 ABC transporter ATPase CP001581.1.gene798.p Protein 1e-32 43