|
Name : LBHH_1728 (LBHH_1728) Accession : YP_005850885.1 Strain : Lactobacillus helveticus H10 Genome accession: NC_017467 Putative virulence/resistance : Unknown Product : Transposase, IS30 family Function : - COG functional category : - COG ID : - EC number : - Position : 1824793 - 1825896 bp Length : 1104 bp Strand : - Note : - DNA sequence : TTGGACCTGTTTGATAGAATGTTAATAACCACAAAAACATCTATGGAGGTCAAAATGGACTCACTACATTCTATCATGGA CAAGCGCAAAAAAGGAACTCATTTATCGCTCGAAGAACGGGTCATTATTCAAACTCGTTTGAAAGATCATTGCTCTTTAC GCTCCATTGCACGAGAAATCGGTTGTTCTCCTAGTACAATTCACTATGAGATTAAGCGAGGAACCGTTAAGCTGTATCAC GGCAATATCAAACGTTATAAAGCCCAGCAAGGTCAAAGCGTTTATCAAAACCATCGTCAGCACTGTGGTCGAAAATCTGA CTTTCTCAAAAAGCACAGATTTATTGATTACGTTCAACGGCACTTCTTTGAAGATGGCTGGTCACTCGATGTCTGCAGTA ATCGCTGCACTGCTGTGGGTGAATTTGCCAGCAGCGATATTGTCTGCACCAGGACGCTTTATAATTATGTCGATCAAGGT CTGCTAAGCATCCACAACTACGATTTGCCAGAAAAGCTCAAACGCAATACCAAAATCCATCGCGTTCGCAAAAATAAGAA GAAGCTAGGCCGCAGTATTGAGCAACGACCACAGGAAGTTAATAAACGCAATGTGTTTGGGCATTGGGAGTGTGACCTTG TTTTAGGCCATAAAACCAAGGACGACGAAGTGCTGCTAACCATGTCCGAACGCATGAGTCGCGAATTCTTAATTATTAAG ATTCCAGATAAGACAGTAGCCAGCGTAATGAATGCCTTTAAAAGCTTGCGTAAGCAATACAGTGAGCATTGGAATGATAT CTTTAAAACTATTACGACTGACAATGGCTCTGAATTTGCAGATCTATCTCAGCTGGAAGATATTTCCAAAACCTTGGTTT ATTATGCTCATCCATATACTTCTTGTGATAAAGGAACTGTAGAGAGACATAATGGGCTTATTCGCAGATTCATTCCTAAA GGCGACTATATCCATAACTATTCTCTCCAACAAATCATTAACATTGAAACTTGGTGTAATTCCTTGCCAAGAAAGATATT GGCTTATCATACACCAGATGAAATCTTTGAAAGAGAACTGGATCAAATCTATCAAACAGCTTAA Protein sequence : MDLFDRMLITTKTSMEVKMDSLHSIMDKRKKGTHLSLEERVIIQTRLKDHCSLRSIAREIGCSPSTIHYEIKRGTVKLYH GNIKRYKAQQGQSVYQNHRQHCGRKSDFLKKHRFIDYVQRHFFEDGWSLDVCSNRCTAVGEFASSDIVCTRTLYNYVDQG LLSIHNYDLPEKLKRNTKIHRVRKNKKKLGRSIEQRPQEVNKRNVFGHWECDLVLGHKTKDDEVLLTMSERMSREFLIIK IPDKTVASVMNAFKSLRKQYSEHWNDIFKTITTDNGSEFADLSQLEDISKTLVYYAHPYTSCDKGTVERHNGLIRRFIPK GDYIHNYSLQQIINIETWCNSLPRKILAYHTPDEIFERELDQIYQTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_0967 | YP_698290.1 | IS1470, transposase | Not tested | Not named | Protein | 4e-74 | 49 |
| CPR_0648 | YP_697974.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-74 | 49 |
| CPR_1088 | YP_698410.1 | IS1470, transposase | Not tested | Not named | Protein | 6e-72 | 49 |
| CPR_0383 | YP_697712.1 | IS1470, transposase | Not tested | Not named | Protein | 6e-73 | 49 |
| CPR_0628 | YP_697955.1 | IS1470, transposase | Not tested | Not named | Protein | 4e-73 | 49 |
| CPR_0379 | YP_697708.1 | IS1470, transposase | Not tested | Not named | Protein | 4e-73 | 49 |
| CPR_0321 | YP_697650.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-73 | 49 |
| CPR_1078 | YP_698400.1 | IS1470, transposase | Not tested | Not named | Protein | 6e-74 | 49 |
| CPR_0314 | YP_697643.1 | IS1470, transposase | Not tested | Not named | Protein | 4e-74 | 49 |
| CPR_0659 | YP_697986.1 | IS1470, transposase | Not tested | Not named | Protein | 7e-48 | 45 |
