|
Name : LBHH_1649 (LBHH_1649) Accession : YP_005850809.1 Strain : Lactobacillus helveticus H10 Genome accession: NC_017467 Putative virulence/resistance : Unknown Product : Serine-tRNA ligase Function : - COG functional category : - COG ID : - EC number : - Position : 1739001 - 1740509 bp Length : 1509 bp Strand : - Note : - DNA sequence : TTGGTGCGAGTGAATGGATGTCGTTTCCAGATTTCGTTAAGATGGGCAATTAATAGTTGCACGGTTTGGCGTCGTTATTC GTCTGTTAAGAGGTGCAGTCTATATCAGACTGAAGATGGGTGGTACCGCGAAGCTGTGCAAGAGCCGATTCGTCCCAAGC AAGGGATGAGTCGGCTCTTTTTTGTATTATGGAGGTTTTTAATGCTTGATATTAAGGTGATTCGTGAGAATCTCGATTGG TCAAAGAAAAAGTTAGCTACACGTGGCATCAAGCCAGAAGAATTGGATGAATTGGTTGAAATCGATGCTAAGCGTCGTAA GGATTTAACCAAGAGTGAACAATTAAAGGCTAAGCGTAATGACGTTTCTAAGCAAATTGCTGAAAAGAAGCGCAATAAGG AAGACGCAAGTGATGCTATTCAAGCTATGCGTGAAGTAGGTAAGGAAATCAAAGACTTAGATAAAGAAGTCGCTGAATTG ACTGAAAAGCAAAACTACATTTTGCTTAGATTACCTAACTTCCCAGCAGATTCAGATCCAATCGGCCCTGATGATAGCTA CAATGAAGAAGTTCGTAAATGGAATGAACCAACTAAGTTTGACTTTAAGCCAAAGGCTCACTGGGACATTGGTACTGACC TTGGTATTTTAGACTGGGATCGTGCTTCTAAAGTTTCAGGTGCACGTTTTGTTTACTACATTGGTGCAGGTGCGCTTTTG GAACGTGCTGTCTTTAACTTCTTCCTTGATGAAAACACTAAGGATGACTATACCGAAGTTATTCCACCATACCTTGTTAA CGATGCATCAATGCAAGGTACTGGACAATTCCCTAAGTTCCACGAAGATGTTTATACTATCGTAGATAACGACGATCCAG ATAAGCCACGTGACTTGACTTTGATTCCAACTGCTGAAGTTCCTTTGGTAAACTACTTCAGAAATGAAATTATTCATGAA AACAAGTTACCAATCAACGTAACTGCTTTATCACCAGCATTTAGAAGTGAAGCAGGTTCAGCAGGTCGTGATACTCGTGG TTTGATTAGAATGCACGAATTCCGCAAAGTTGAAATGGTTAAGGTATGTAAGCCAGATGAATCATGGGATGAACTTGAAA AGTTGACCCACAATGCTGAACACTTATTGCAAAAGTTAGGTTTGCCATATCACGTAGTCGCTTTGTCAACTGGGGATGCA AGTTTTACTAGTGCTAAGACTTACGATCTTGAAGTTTGGATGCCTGCACAAGACAAGTACCGTGAAATTTCAAGTTGTTC TAACTGTACTGACTTTCAAGCTCGTCGTGCACAAATTCGTTACCGTGACGAAGATGGCAAGCTTCACTTAGCTCATACTT TAAATGGTTCTGGTTTAGCCGTAGGTAGAGCAGTAGCTGCAATTTTGGAAAACTACCAAAACGAAGATGGTTCTGTAACT GTTCCTGATGTTCTTGTACCATACATGAATGGTATGAAGAAGATTACTAAAGAATCAGGTTTGATTTAA Protein sequence : MVRVNGCRFQISLRWAINSCTVWRRYSSVKRCSLYQTEDGWYREAVQEPIRPKQGMSRLFFVLWRFLMLDIKVIRENLDW SKKKLATRGIKPEELDELVEIDAKRRKDLTKSEQLKAKRNDVSKQIAEKKRNKEDASDAIQAMREVGKEIKDLDKEVAEL TEKQNYILLRLPNFPADSDPIGPDDSYNEEVRKWNEPTKFDFKPKAHWDIGTDLGILDWDRASKVSGARFVYYIGAGALL ERAVFNFFLDENTKDDYTEVIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKPRDLTLIPTAEVPLVNYFRNEIIHE NKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVCKPDESWDELEKLTHNAEHLLQKLGLPYHVVALSTGDA SFTSAKTYDLEVWMPAQDKYREISSCSNCTDFQARRAQIRYRDEDGKLHLAHTLNGSGLAVGRAVAAILENYQNEDGSVT VPDVLVPYMNGMKKITKESGLI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 6e-130 | 65 |
