Gene Information

Name : LBHH_1571 (LBHH_1571)
Accession : YP_005850739.1
Strain : Lactobacillus helveticus H10
Genome accession: NC_017467
Putative virulence/resistance : Unknown
Product : Transposase IS1201
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1645365 - 1646543 bp
Length : 1179 bp
Strand : +
Note : -

DNA sequence :
ATGAATGATTTTACCAAAAATATGGCTCAAGCTCTATTCAATCAAGACAAAATTAATGATTTATTGCGTAAAGAATTACA
ACAAGCAGTTAATGACTTGTTAGAAGCTGAATTAACTGCCTTTTTAGGTTATAATCCTTATGCAAGAGACGGCTGGAATA
CCGGCAATTCTAGGAACGGTGCCTACTTTCGCAAGGTGGATACGCAGTTTGGCAAAATTGAAATCCAGGTGCCACGAGAC
CGCAACGGCCTGTTTCATCAGCACACGCTGCCTGACTACAAGCAGCATGCAGATGTGTTGGAAAACATGATCATCAAGCT
TTACTCTAAAGGCGTAACTACCAGAGAGATAGCTGATTTGATTGAAAAAATGTATGGCAGCCATTACAGCCCCGCTCAAG
TATCCAATATTTCTAAGCAGATGATCCCCAAGGTAGAGGCCTATCACAAGCGTAAGCTGAACGATAAGTTCTTCTGCGTT
TATCTAGACGCTGCCTACGTTCCTCTGCGCCGCATAACCTTTGATCGTGAAGCTGTCTATATTGCCATTGGTATCAAACC
TAATGGCCACAAGGAAGTTATCGACTACTGCATTGCGCCCAATGAAAACATTGAAGTCTGGACGGAGCTGCTCCAAAGCA
TGAAATCTCGCGGCTTAGAGCAAGCAGAGCTTTTTCTTTCAGATGGCGTTGTGGGCATGAAGACAGCACTGGCAAAGACC
TATCCTCAAGCTCATTTCCAGCGTTGCTTGGTTCATGTCATGCGTAATATCTGCGCTAAAGTACGCGTGGAGGATCGCGA
GGCAATTATGAACGAATTCAAGCAGATTCACCAGCAAGCCAATAAAGCAGCTGCTGTTGATGTATTGCATGCCTTCTATG
CCAAATGGGACAAGAGTTATAATCATGTCATAAGAAACCTGAAAGACATCGAGCCAGACCTGCTGGTCTTCTATAATTAT
CCTAAGCAGATCAGAGCTTCAATTTACTCTACCAACATGATTGAATCTTTTAACAACGTCATTAAGCGCAAGGCTAAGCC
TAAAGCAGAGTTTCCGACTGAACAGTCGCTTGATACTTTCATTGGCATCCAAGCAATGAGTTACAATGACCGCTACTTCA
ACCGAATTCACAAAGGCTTTGGTCAGGTTCAGGACACCTTAGAATCTTACTTTGATTAA

Protein sequence :
MNDFTKNMAQALFNQDKINDLLRKELQQAVNDLLEAELTAFLGYNPYARDGWNTGNSRNGAYFRKVDTQFGKIEIQVPRD
RNGLFHQHTLPDYKQHADVLENMIIKLYSKGVTTREIADLIEKMYGSHYSPAQVSNISKQMIPKVEAYHKRKLNDKFFCV
YLDAAYVPLRRITFDREAVYIAIGIKPNGHKEVIDYCIAPNENIEVWTELLQSMKSRGLEQAELFLSDGVVGMKTALAKT
YPQAHFQRCLVHVMRNICAKVRVEDREAIMNEFKQIHQQANKAAAVDVLHAFYAKWDKSYNHVIRNLKDIEPDLLVFYNY
PKQIRASIYSTNMIESFNNVIKRKAKPKAEFPTEQSLDTFIGIQAMSYNDRYFNRIHKGFGQVQDTLESYFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0595 NP_814357.1 ISEf1, transposase Not tested Not named Protein 8e-101 50
unnamed AAM21176.1 transposase Not tested Not named Protein 4e-101 50
unnamed AAM21184.1 transposase Not tested Not named Protein 4e-101 50
ef0057 AAM75262.1 EF0057 Not tested Not named Protein 4e-101 50