Gene Information

Name : LBHH_1374 (LBHH_1374)
Accession : YP_005850552.1
Strain : Lactobacillus helveticus H10
Genome accession: NC_017467
Putative virulence/resistance : Virulence
Product : Alkaline phosphatase synthesis transcriptional regulatory protein phoP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1440238 - 1440960 bp
Length : 723 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTTTGAGAATCTTAATGGTTGAAGATGATAATTCCGTCGCTGAAATGATGGGAATGTTTTTCAAAAAAGAAGGTTG
GCAGCAAGATATCGCTGTCGACGGTGTCGAAGCCGTCGATATGTTTAAAGAAAATGCAGATAAGTATGATTTGATTACAT
TAGATTTGAATTTGCCTAAAAAAGATGGTATTCAAGTTGCTAAGGAAGTAAGAGCTATTTCTCCTACTGTTCCGATTATT
ATGCTTACTGCTAGGGGCAGTGAATCAGATCAAGTTCTAGGATTAGGAATTGGTGCTGATGAGTATGTGACTAAGCCATT
TAGTCCAATCGCCTTAATTGCCCGCATCAAGGCACTTCATCGTCGCGTGATGATGGAAGAAGACGTTCAAACACAAGAAA
ATAATAATCAAGAATATGAAATTCAGACTGCTCATCTAAAGATTTCTAAGGATAGACGAGAAGTTTTATTTGATGACCAA
CCAGTTGTTGATTTAACGCCGAAGGAATTTGATTTGTTATATACAATGGCGCAAAAGCCTAAGCAAGTCTTTTCGCGTGA
TCAATTATTAGAGCTGGTCTGGGGATATGAGTATTATGGTGAAGAACGAACTGTTGACGCCCATATTAAAAAATTGCGCC
AAAAACTAGAAAAAGTTGGTGCCAAGGTTATCCAAACAGTCTGGGGCGTTGGCTATAAGTTTGACGATTCGCAGGTCAAA
TAA

Protein sequence : 
MSLRILMVEDDNSVAEMMGMFFKKEGWQQDIAVDGVEAVDMFKENADKYDLITLDLNLPKKDGIQVAKEVRAISPTVPII
MLTARGSESDQVLGLGIGADEYVTKPFSPIALIARIKALHRRVMMEEDVQTQENNNQEYEIQTAHLKISKDRREVLFDDQ
PVVDLTPKEFDLLYTMAQKPKQVFSRDQLLELVWGYEYYGEERTVDAHIKKLRQKLEKVGAKVIQTVWGVGYKFDDSQVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 5e-35 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 7e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LBHH_1374 YP_005850552.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_012469.1.7685629. Protein 9e-40 43
LBHH_1374 YP_005850552.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP HE999704.1.gene2815. Protein 7e-41 43
LBHH_1374 YP_005850552.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP CP001918.1.gene5135. Protein 1e-25 43
LBHH_1374 YP_005850552.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_002952.2859905.p0 Protein 3e-41 42
LBHH_1374 YP_005850552.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_002951.3237708.p0 Protein 2e-41 42
LBHH_1374 YP_005850552.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_003923.1003749.p0 Protein 2e-41 42
LBHH_1374 YP_005850552.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_002758.1121668.p0 Protein 2e-41 42
LBHH_1374 YP_005850552.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_009641.5332272.p0 Protein 2e-41 42
LBHH_1374 YP_005850552.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_013450.8614421.p0 Protein 2e-41 42
LBHH_1374 YP_005850552.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_007793.3914279.p0 Protein 2e-41 42
LBHH_1374 YP_005850552.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_007622.3794472.p0 Protein 3e-41 42
LBHH_1374 YP_005850552.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_002745.1124361.p0 Protein 2e-41 42
LBHH_1374 YP_005850552.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_009782.5559369.p0 Protein 2e-41 42
LBHH_1374 YP_005850552.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP AE000516.2.gene3505. Protein 6e-36 42
LBHH_1374 YP_005850552.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP AF155139.2.orf0.gene Protein 2e-41 41
LBHH_1374 YP_005850552.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP FJ349556.1.orf0.gene Protein 2e-40 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LBHH_1374 YP_005850552.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP VFG1563 Protein 3e-35 42
LBHH_1374 YP_005850552.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP VFG1702 Protein 3e-35 42