Gene Information

Name : LBHH_1225 (LBHH_1225)
Accession : YP_005850410.1
Strain : Lactobacillus helveticus H10
Genome accession: NC_017467
Putative virulence/resistance : Unknown
Product : Transposase IS1201
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1289052 - 1290230 bp
Length : 1179 bp
Strand : -
Note : -

DNA sequence :
ATGAATGATTTTACCAAAAATATGGCACAAGCTCTATTCAATCAAGACAAAATAAACGATTTATTGCGCAAAGAACTCCA
GCAAGCAGTTAATGACTTATTGGAAGCTGAACTGACTGCGTTTTTAGGCTATGATCCTTATGCCAGAACTGGCTGGAATA
CCGGCAATTCACGCAATGGTGCTTACTTTCGCAAAGTTGATACGCAATTTGGCGAGATTGAAATTCAGGTGCCTAGGGAT
CGCAATGGCATGTTTCATCAGCACACGCTGCCTGACTACAAGCAGCACTCCGATGTCTTGGAAAGCATGATTATCAAGCT
ATCTTCTAAAGGCGTAACCACCAGAGAAATAGCCGACTTGATTGAAAAGATGTACGGCAGTCATTACAGCCCAGCTCAGG
TATCTAACATCTCCAAGCAGATGATTCCAAAAGTTGAGGCCTATCATCAGCGCAAACTCAGTGACAAGTTCTTCTGCGTT
TATTTAGACGCAACTTACATTCCTTTGCGTCGCATAACCTTTGATCGTGAAGCAGTTTATATTGCCATTGGCATCAAGCC
TAATGGTCACAAGGAAGTTATCGATTACCGCATTGCTCCCAGCGAAAACGTTGAGAATTGGACGGAAATGCTTCAAGACA
TGAAGTCTCGCGGTCTAGAGCAGGTTGAGCTCTTTCTTTCAGATGGCGTTGTTGGTATGAAAACAGCGTTGGAGCAGACT
TATCCGAAAGCTCATTTTCAACGCTGTCTAGTTCATGTCATGCGCAATATTTGCGCTAAAGTACGCGTAGATGATCGCGA
AACGATCATGAATGAATTCAAGCAAATCCATCAACAGCCAAATAAAGAAGCTGCGATCAAAGTCTTGCACGCCTTCTATG
ACAAGTGGAACAGAGCTTATAATCATGTCATTAGAAACCTCAAGGAGATTGAACCTGATCTGCTGGTCTTTTATGACTAT
CCTAAACAAATCAGGGCCTCAATTTACTCCACCAATATGATCGAATCCTTTAACAACGTTATCAAGCGTAAAGCTAAGCC
TAAAGCAGAGTTTCCAACTGAACAGTCGCTTGATACTTTTATTGGCATTCAGGGGATGAGCTACAACGAGCGCTATTTCA
ATCGAATCCACAAAGGCTTTGGTCAGGTTCAGGATACCTTAGAATCCTACTTTGATTAA

Protein sequence :
MNDFTKNMAQALFNQDKINDLLRKELQQAVNDLLEAELTAFLGYDPYARTGWNTGNSRNGAYFRKVDTQFGEIEIQVPRD
RNGMFHQHTLPDYKQHSDVLESMIIKLSSKGVTTREIADLIEKMYGSHYSPAQVSNISKQMIPKVEAYHQRKLSDKFFCV
YLDATYIPLRRITFDREAVYIAIGIKPNGHKEVIDYRIAPSENVENWTEMLQDMKSRGLEQVELFLSDGVVGMKTALEQT
YPKAHFQRCLVHVMRNICAKVRVDDRETIMNEFKQIHQQPNKEAAIKVLHAFYDKWNRAYNHVIRNLKEIEPDLLVFYDY
PKQIRASIYSTNMIESFNNVIKRKAKPKAEFPTEQSLDTFIGIQGMSYNERYFNRIHKGFGQVQDTLESYFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0057 AAM75262.1 EF0057 Not tested Not named Protein 3e-103 52
EF0595 NP_814357.1 ISEf1, transposase Not tested Not named Protein 6e-103 52
unnamed AAM21176.1 transposase Not tested Not named Protein 3e-103 52
unnamed AAM21184.1 transposase Not tested Not named Protein 3e-103 52