Gene Information

Name : cbh (LBHH_1220)
Accession : YP_005850405.1
Strain : Lactobacillus helveticus H10
Genome accession: NC_017467
Putative virulence/resistance : Virulence
Product : Choloylglycine hydrolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1284239 - 1285006 bp
Length : 768 bp
Strand : +
Note : -

DNA sequence : 
ATGTGTTCATCTATTATATTTAGTCCTAAAGATCATTACTTTGGTCGTAACCTTGACCTTGAAATCACTTTTGGACAACA
AGTTATTATTACCCCACGTGACTACGTATTCAAATTCCGTGATATGCCTGAAATCGATCATCACTATGCAATGGTTGGTA
TTGCATTAAATGCTGGTGGTTATCCTTTATACTTTGACGCAGCTAATGAAAAAGGTCTAGGAATGGGCGGCCTTAATTAT
CCTGATAATGCCATTTACTACGATGTAAAAGAAGGCAAGGACAACATCGCCTCATTCGAATTCATCCCATGGATCTTAAG
CCAAGCAGCTACTGTTGAAGAAGCTAAGAAGTTATTAGCCAAGATCAACATCACTAAGAAGAACTTCAGCGACAAGATGC
ATGTATCCCCACTTCACTGGATCATCGCAGATAAAACTGGTGCTTCTATTGTTGTTGAAACTGACGCAGACGGTATGCAC
GTTTACGACAACCCTGTCGGCTGCTTAACTAACAACCCACAATTCCCTAAGCAATTGTTCAACTTGAACAACTACCAAGA
CGTTTCACCTGCCATGCCTAAGAACAACTTCTCAAGCAAAATTAACATGGATGGCTACAGCCGCGGTCTTGGTTCACGTA
ACTTGCCAGGTGGTATGGACGCTGAATCACGTTTTGTCAGAGTAGCATTCAACAAGTTCAATGCTCCAGTTGCTGATACC
GAAGAAGAAAACATTGATACCCTACTTCCACATCTTGCATTCAGCTGA

Protein sequence : 
MCSSIIFSPKDHYFGRNLDLEITFGQQVIITPRDYVFKFRDMPEIDHHYAMVGIALNAGGYPLYFDAANEKGLGMGGLNY
PDNAIYYDVKEGKDNIASFEFIPWILSQAATVEEAKKLLAKINITKKNFSDKMHVSPLHWIIADKTGASIVVETDADGMH
VYDNPVGCLTNNPQFPKQLFNLNNYQDVSPAMPKNNFSSKINMDGYSRGLGSRNLPGGMDAESRFVRVAFNKFNAPVADT
EEENIDTLLPHLAFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0521 NP_814299.1 choloylglycine hydrolase Not tested Not named Protein 1e-65 54
ef0040 AAM75246.1 EF0040 Not tested Not named Protein 1e-65 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cbh YP_005850405.1 Choloylglycine hydrolase VFG2162 Protein 1e-69 54