Gene Information

Name : LBHH_0011 (LBHH_0011)
Accession : YP_005849241.1
Strain : Lactobacillus helveticus H10
Genome accession: NC_017467
Putative virulence/resistance : Unknown
Product : Transposase IS1201
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 12115 - 13293 bp
Length : 1179 bp
Strand : +
Note : -

DNA sequence :
ATGAATGATTTTACCAAAAATATGGCTCAAGCTCTATTCAATCAAGATAAAATTAATGATTTGCTTCGTCATGAACTCCA
ACAAGCTGTTAATGACTTGTTGGAAGCTGAACTGACTGCGTTTTTAGGCTATGATCCTTATGCCAGAACTGGCTGGAATA
CCGGCAATTCACGCAATGGTGCTTACTTTCGCAAAGTTGATACGCAATTTGGCGAGATTGAAATTCAGGTGCCTAGGGAT
CGCAATGGCATGTTTCATCAGCACACGCTGCCTGACTACAAGCAGCACTCCGATGTCTTGGAAAGCATGATTATCAAGCT
ATATTCTAAAGGCGTAACCACCAGAGAAATAGCCGACTTGATTGAAAAGATGTACGGCAGTCATTACAGCCCAGCTCAGG
TATCTAACATCTCCAAGCAGATGATTCCAAAAGTTGAGGCCTATCATCAGCGCAAACTCAGTGACAAGTTCTTCTGCGTT
TATTTAGACGCAACTTACATTCCTTTGCGTCGCATAACCTTTGATCGTGAAGCAGTTTATATTGCCATTGGCATCAAGCC
TAATGGTCACAAGGAAGTTATCGATTACCGCATTGCTCCCAGCGAAAACGTTGAGAATTGTACGGAAATGCTTCAAGACA
TGAAGTCTCGCGGTCTAGAGCAGGTTGAGCTCTTTCTTTCAGATGGCGTTGTTGGTATGAAAACAGCGTTGGAGCAGACT
TATCCGAAAGCTCATTTTCAACGCTGTCTAGTTCATGTCATGCGTAATATTTGCGCTAAAGTACGCGTAGATGATCGCGA
AACGATCATGAATGAATTCAAGCAAATCCATCAACAGCCAAATAAAGAAGCTGCGATCAAAGTCTTGCACGCCTTCTATG
ACAAGTGGAACAGAGCTTATAATCATGTCATTAGAAACCTCAAGGAGATTGAACCTGATCTGCTGGTCTTTTATGACTAT
CCTAAACAAATCAGGGCCTCAATTTACTCCACCAATATGATCGAATCCTTTAACAACGTTATCAAGCGTAAAGCTAAGCC
TAAAGCAGAGTTTCCAACTGAACAGTCGCTTGATACTTTTATTGGCATTCAGGCGATGAGCTACAACGAGCGCTATTTCA
ATCGAATCCACAAAGGCTTTGGTCAGGTTCAGGATACCTTAGAATCCTACTTTGATTAA

Protein sequence :
MNDFTKNMAQALFNQDKINDLLRHELQQAVNDLLEAELTAFLGYDPYARTGWNTGNSRNGAYFRKVDTQFGEIEIQVPRD
RNGMFHQHTLPDYKQHSDVLESMIIKLYSKGVTTREIADLIEKMYGSHYSPAQVSNISKQMIPKVEAYHQRKLSDKFFCV
YLDATYIPLRRITFDREAVYIAIGIKPNGHKEVIDYRIAPSENVENCTEMLQDMKSRGLEQVELFLSDGVVGMKTALEQT
YPKAHFQRCLVHVMRNICAKVRVDDRETIMNEFKQIHQQPNKEAAIKVLHAFYDKWNRAYNHVIRNLKEIEPDLLVFYDY
PKQIRASIYSTNMIESFNNVIKRKAKPKAEFPTEQSLDTFIGIQAMSYNERYFNRIHKGFGQVQDTLESYFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0595 NP_814357.1 ISEf1, transposase Not tested Not named Protein 3e-101 52
unnamed AAM21176.1 transposase Not tested Not named Protein 2e-101 52
unnamed AAM21184.1 transposase Not tested Not named Protein 2e-101 52
ef0057 AAM75262.1 EF0057 Not tested Not named Protein 2e-101 52