Gene Information

Name : LBHH_0096 (LBHH_0096)
Accession : YP_005849322.1
Strain : Lactobacillus helveticus H10
Genome accession: NC_017467
Putative virulence/resistance : Virulence
Product : Alkaline phosphatase synthesis transcriptional regulatory proteinphoP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 103271 - 103987 bp
Length : 717 bp
Strand : +
Note : -

DNA sequence :
ATGCCAAAAAAGATTCTCGTCGTCGACGATGAAAAGCCGATTTCTGATATCATTAAATTTAATTTAACTAAGGAAGGCTT
TGATGTCGACACTGCCTATGATGGCGAAGAAGCTGTTAAGAAAGTTGACGAATACGATCCAGACTTAATGATTCTGGATT
TGATGTTACCAAAGAAAGATGGACTCGAGGTTGCTCGTGAAGTTCGTCAAACGCACGATATGCCAATTATCATGGTAACA
GCTAAAGATACTGAAATTGATAAAGTACTTGGTCTAGAAATGGGTGCCGATGACTATGTCACTAAGCCTTTCTCTAATAG
AGAATTAGTTGCCCGCGTTAAGGCTAACTTGCGCCGTCGTGACATTGTTAAGAAGGCAGAAGCAGCTAACCAAGACGATA
CAGATAAGAATATTAAGATCGGTAACTTGGTTATCATGCCAGATGCCTATATCGTTGAAAAAGATGGTCGGAAGATTGAG
CTTACTCACCGTGAATTTGAGCTTCTTTACTACTTAGCTCAACATATGGGGCAAGTTATGACTCGTGAACACCTTTTACA
AACTGTTTGGGGCTATGACTACTTTGGCGATGTGCGTACAGTAGACGTAACTGTTCACCGTTTGAGAGAAAAGATTGAAG
ACAACCCAATCCAACCTCAAGTTTTGGTTACTCGTCGTGGTGTAGGATATTACGTAAAACAGCCAAGTGAAGGTTAA

Protein sequence :
MPKKILVVDDEKPISDIIKFNLTKEGFDVDTAYDGEEAVKKVDEYDPDLMILDLMLPKKDGLEVAREVRQTHDMPIIMVT
AKDTEIDKVLGLEMGADDYVTKPFSNRELVARVKANLRRRDIVKKAEAANQDDTDKNIKIGNLVIMPDAYIVEKDGRKIE
LTHREFELLYYLAQHMGQVMTREHLLQTVWGYDYFGDVRTVDVTVHRLREKIEDNPIQPQVLVTRRGVGYYVKQPSEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-31 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_012469.1.7685629. Protein 1e-65 65
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002952.2859905.p0 Protein 4e-50 53
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002951.3237708.p0 Protein 5e-50 53
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_003923.1003749.p0 Protein 4e-50 53
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002758.1121668.p0 Protein 5e-50 53
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_007622.3794472.p0 Protein 4e-50 53
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_009641.5332272.p0 Protein 5e-50 53
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_013450.8614421.p0 Protein 5e-50 53
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_007793.3914279.p0 Protein 5e-50 53
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002745.1124361.p0 Protein 5e-50 53
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_009782.5559369.p0 Protein 5e-50 53
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP HE999704.1.gene2815. Protein 6e-43 52
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_012469.1.7686381. Protein 2e-38 46
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP001918.1.gene5135. Protein 3e-28 45
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP AE000516.2.gene3505. Protein 9e-33 44
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002695.1.915041.p Protein 5e-33 44
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP000034.1.gene3834. Protein 5e-33 44
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP FJ349556.1.orf0.gene Protein 2e-34 44
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP AE016830.1.gene1681. Protein 2e-37 43
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP BAC0533 Protein 2e-32 43
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP000647.1.gene4257. Protein 2e-32 43
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP001138.1.gene4273. Protein 3e-32 43
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP AF155139.2.orf0.gene Protein 3e-34 43
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_003923.1003417.p0 Protein 2e-32 42
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_013450.8614146.p0 Protein 2e-32 42
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002951.3238224.p0 Protein 2e-32 42
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_007793.3914065.p0 Protein 2e-32 42
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002758.1121390.p0 Protein 2e-32 42
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_010079.5776364.p0 Protein 2e-32 42
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002952.2859858.p0 Protein 2e-32 42
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_007622.3794948.p0 Protein 2e-32 42
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP AM180355.1.gene1830. Protein 2e-33 42
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP004022.1.gene3215. Protein 3e-31 42
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP AE015929.1.gene1106. Protein 2e-26 41
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_014475.1.orf0.gen Protein 8e-33 41
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_005054.2598277.p0 Protein 8e-33 41
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_010410.6002989.p0 Protein 2e-23 41
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_010400.5986590.p0 Protein 7e-23 41
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_011595.7057856.p0 Protein 2e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP VFG1563 Protein 8e-32 41
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP VFG1702 Protein 7e-32 41
LBHH_0096 YP_005849322.1 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP VFG1389 Protein 6e-29 41