Gene Information

Name : LC40_0991 (LC40_0991)
Accession : YP_005849052.1
Strain : Lactobacillus fermentum CECT 5716
Genome accession: NC_017465
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1771137 - 1772228 bp
Length : 1092 bp
Strand : -
Note : -

DNA sequence :
GTGGCCGCTAATCAGTTCCTTCAAAATGAACTGACTGCGGTGCTAGGCTACGAACCACATACTCGGATCGACCGATCAAA
AGACGACGTGAACTACCGGAACGGGACGTACACCCGCACGATCGACACTGAGTACGGTGAAATTAATCTGACGATCCCAC
GGGACCGGTTAAACAAGTTTCAAAACGCCCTCTTCCCTCCTTACGTGCGTCGGACTGATGGACTGGAGGAAATGGTCATC
AAGATGTACTCCAAGGGCGTCACAACTCGTGAAATCGCTGATATGGTTGAGAGAATGTACGGCCACTACTACTCACCAAC
CACGGTTTCAAACATCACTAAGCGGACGGAACACCTGGTTGAAGAGTTCCACGAGCGCAAATTCAAGTACTCACAGTACG
TCTGTGTGTTCCTCGATGCTACTTACATTCCGTTACGCCGTGGTACCGTTGAACGAGAAGCCGTTAACGTAGCGATCGGA
ATTCGAAGTGACGGCGGTAAGGAAGTTCTTGACTACAGTATCGCACCGACCGAGAACGGAGCCGCTTGGTCTGAACTACT
CCAGGGATTACGCGCACGGGGGATTAAAGATATTCAGTTGTTCATCGCCGACGGTTTAGTTGGACTTCAATCTGCGATTG
AGGCTAACTACCCGCAGGCGAAGTTTCAACGGTGCTGGGTTCACGCAGAGCGCAACCTTTTAGGGTACGTTCGCAAAAAC
GATCGCAGGGAGARTWTKASGCMATTCGGCAAGCAGAGAACCTACAAAGCCGCCAAAGAACGATTGGCGGCTTTCAGTGC
TAAGTGGGAGTCRAGTTATAAGCGTCGAATCAAGAATCTAGTCCAAATGGAGGAGCTATTCACGTTCTTRAGWTTTCCAA
CTGCGATCCGTCAGACCATCTACTCGACGAACCTAATTGAGTCGTTCAATAAGAGCCTGAAGAAGATGGTCCGACGTAAA
GAGCAGTTCCCAAACGAAGGGGCCCTCGATCGCTTTATCATGACGCAAGTGATGGAGTACAACGATAAATTTGAGAATCG
AGCACATCGGGGATTCAAGGACTGTCACGACACGCTTGATTCGATGTTTTAG

Protein sequence :
MAANQFLQNELTAVLGYEPHTRIDRSKDDVNYRNGTYTRTIDTEYGEINLTIPRDRLNKFQNALFPPYVRRTDGLEEMVI
KMYSKGVTTREIADMVERMYGHYYSPTTVSNITKRTEHLVEEFHERKFKYSQYVCVFLDATYIPLRRGTVEREAVNVAIG
IRSDGGKEVLDYSIAPTENGAAWSELLQGLRARGIKDIQLFIADGLVGLQSAIEANYPQAKFQRCWVHAERNLLGYVRKN
DRREXXXXFGKQRTYKAAKERLAAFSAKWESSYKRRIKNLVQMEELFTFFXFPTAIRQTIYSTNLIESFNKSLKKMVRRK
EQFPNEGALDRFIMTQVMEYNDKFENRAHRGFKDCHDTLDSMF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAM21184.1 transposase Not tested Not named Protein 5e-82 48
ef0057 AAM75262.1 EF0057 Not tested Not named Protein 5e-82 48
EF0595 NP_814357.1 ISEf1, transposase Not tested Not named Protein 3e-82 48
unnamed AAM21176.1 transposase Not tested Not named Protein 5e-82 48