Gene Information

Name : LC40_0941 (LC40_0941)
Accession : YP_005849008.1
Strain : Lactobacillus fermentum CECT 5716
Genome accession: NC_017465
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1672699 - 1673874 bp
Length : 1176 bp
Strand : -
Note : -

DNA sequence :
ATGAACCAGTTTAACAAAGATATTATCGCAGCGCTATCTTCCGACAAAGATATTACCCTGAATGAAGTCTTACGTCGTCA
AATCGAAGTGGCCGCTAATCAGTTCCTTCAAAATGAACTGACTGCGGTGCTAGGCTACGAACCACATACTCGGATCGACC
GATCAAAAGACGACGTGAACTACCGGAACGGGACGTACACCCGCACGATCGACACTGAGTACGGTGAAATTAATCTGACG
ATCCCACGGGACCGGTTAAACAAGTTTCAAAACGCCCTCTTCCCTCCTTACGTGCGTCGGACTGATGGACTGGAGGAAAT
GGTCATCAAGATGTACTCCAAGGGCGTCACAACTCGTGAAATCGCTGATATGGTTGAGAGAATGTACGGCCACTACTACT
CACCAACCACGGTTTCAAACATCACTAAGCGGACGGAACACCTGGTTGAAGAGTTCCACGAGCGCAAATTCAAGTACTCA
CAGTACGTCTGTGTGTTCCTCGATGCTACTTACATTCCGTTACGCCGTGGTACCGTTGAACGAGAAGCCGTTAACGTAGC
GATCGGAATTCGAAGTGACGGCGGTAAGGAAGTTCTTGACTACAGTATCGCACCGACCGAGAACGGAGCCGCTTGGTCTG
AACTACTCCAGGGATTACGCGCACGGGGGATTAAAGATATTCAGTTGTTCATCGCCGACGGTTTAGTTGGACTTCAATCT
GCGATTGAGGCTAACTACCCGCAGGCAAAGTTTCAACGGTGCTGGGTCCACGCAGAGCGCAACCTTTTAGGGTACGTTCG
CAAAAACGATCGCAGGGAGATTATCACCGACTTTAAGGCTATTCGGCAAGCAGAGAACCTACAAGCCGCCAAAGAACAAT
TGGCGGCTTTCAGTGCTAAGTGGGAGTCCAGTTATAAGCGTCGAATCAAGAATCTAGTCCAAATGGAGGAGCTATTCACG
TTCTTCAGTTTTCCAACTGCGATCCGTCAGACCATCTACTCGACGAACCTAATTGAGTCGTTCAATAAGAGCCTGAAGAA
GATGGTCCGACGTAAAGAGCAGTTCCCAAACGAAGGGGCCCTCGATCGCTTTATCATGACGCAAGTAATGGAGTACAACG
ATAAATTTGAGAATCGAGCACATCGGGGAGTTCAAGGACTGTCACGACACGCTTGA

Protein sequence :
MNQFNKDIIAALSSDKDITLNEVLRRQIEVAANQFLQNELTAVLGYEPHTRIDRSKDDVNYRNGTYTRTIDTEYGEINLT
IPRDRLNKFQNALFPPYVRRTDGLEEMVIKMYSKGVTTREIADMVERMYGHYYSPTTVSNITKRTEHLVEEFHERKFKYS
QYVCVFLDATYIPLRRGTVEREAVNVAIGIRSDGGKEVLDYSIAPTENGAAWSELLQGLRARGIKDIQLFIADGLVGLQS
AIEANYPQAKFQRCWVHAERNLLGYVRKNDRREIITDFKAIRQAENLQAAKEQLAAFSAKWESSYKRRIKNLVQMEELFT
FFSFPTAIRQTIYSTNLIESFNKSLKKMVRRKEQFPNEGALDRFIMTQVMEYNDKFENRAHRGVQGLSRHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAM21176.1 transposase Not tested Not named Protein 9e-90 48
unnamed AAM21184.1 transposase Not tested Not named Protein 9e-90 48
ef0057 AAM75262.1 EF0057 Not tested Not named Protein 9e-90 48
EF0595 NP_814357.1 ISEf1, transposase Not tested Not named Protein 5e-90 48