Gene Information

Name : LC40_0903 (LC40_0903)
Accession : YP_005848971.1
Strain : Lactobacillus fermentum CECT 5716
Genome accession: NC_017465
Putative virulence/resistance : Virulence
Product : glycosyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1596233 - 1597165 bp
Length : 933 bp
Strand : -
Note : -

DNA sequence :
ATGCCAAAGCTATCGATCGTGGTTCCTTGCTATAACGAACAGAAGGTACTTCCTCTTTTTTACTCAGCAGTAGAAGAGGT
AGTTCAAAAAATTAAAAATTTAGAAGTCGAATATTGGCTGGTTGATGATGGCTCTGCTGACCAGACGTTAGCAGAAATGC
GAAAGCTTCATACCGATGATCCTAAACGGGTACACTACCTAACCTTTTCTCGTAATTTTGGAAAGGAAAGCGCCATGTAT
GCTGGACTTAGTGTGGCCACGGGGGACTACGTAGTAATAATGGATGCTGATCTCCAAGATCCACCTTCTTTCTTACAACA
AATGTATTCAATCATGCAGGGTGGTGAATACGATTGTGTTGCAACGCGGCGTACTGATAGAACCGGAGAAGCGAAGTTTA
AGTCATTCCTTAGTGACCAGTTCTATAAGGTTATCAATCGAATTTCTCAAACCAATATCGTTCCAGGGGCCCGGGACTTT
CGAATGATGTCCCGCCAAATGGTRGATGCCYTTCTTTCAATGAYWGAATACAGCCGTTTTTCCAAGGGYATTTTCTCCTG
GGTCGGMTTTAAAACTAAGTATTTAGAGTARAAAAACGTTGAGCGGGTGGCCGGAACCACTGATTGGTCAACTTGGAAAC
TATTTAAGTATGCAATGGACGGAATTGCCGACTTCTCGCAGGCACCATTATCATTAGCAGTRTGGCTAGGAACGACRTCC
TTTATTYTWTCYATRWTMGGGRTYATRTTTGTMYTMATRCGMCGAKTYKTAGAACCAWCYAGTAGTGCCTTRGGSTGGGC
CTCYATGGTTTGCATRATRCTTTTYCTAGGMGGWRTYCAGCTGCTCTGRATTGGGATRGTCGGAAAGTACATCGGTCGTA
TCTACATGCAAGTTAAGAACAGACCGATTTACATCATTAAGGAAAAGAAATAA

Protein sequence :
MPKLSIVVPCYNEQKVLPLFYSAVEEVVQKIKNLEVEYWLVDDGSADQTLAEMRKLHTDDPKRVHYLTFSRNFGKESAMY
AGLSVATGDYVVIMDADLQDPPSFLQQMYSIMQGGEYDCVATRRTDRTGEAKFKSFLSDQFYKVINRISQTNIVPGARDF
RMMSRQMVDAXLSMXEYSRFSKGIFSWVGFKTKYLEYKNVERVAGTTDWSTWKLFKYAMDGIADFSQAPLSLAVWLGTTS
FIXSIXGLIFVXIRRXJEPXSSAFGWASMVCIILLLGGLQLLCIGIVGKYIGRIYMQVKNRPIYIIKEKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 2e-40 42
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 4e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LC40_0903 YP_005848971.1 glycosyltransferase VFG0670 Protein 7e-39 43