Gene Information

Name : LC40_0776 (LC40_0776)
Accession : YP_005848875.1
Strain : Lactobacillus fermentum CECT 5716
Genome accession: NC_017465
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1380851 - 1382038 bp
Length : 1188 bp
Strand : -
Note : -

DNA sequence :
ATGAACCAGTTTAACAAAGATATTATCGCAGCGCTATCTTCAGACAAAGATATTACCCTGAATGAAGTCTTACGTCGTCA
AATCGAAGTGGCCGCTAATCAGTTCCTTCAAAATGAACTGACTGCGGTGCTAGGCTACGAACCACATACTCGGATCGACC
GATTAAAAGACGACGTGAACTACCGGAACGGGACGTACACCCGCACGATCGACACTGAGTACGGTGAAATTAATCTGACG
ATCCCACGGGACCGGTTAAACAAGTTTCAAAACGCCCTCTTCCCTCCTTACGTGCGTCGGACTGATGGACTGGAGGAAAT
GGTCATCAAGATGTACTCCAAGGGCGTCACAACTCGTGAAATCGCTGATATGGTTGAGAGAATGTACGGCCACTACTACT
CACCAACCACGGTTTCAAACATCACTAAGCGGACGGAACACCTGGTTGAAGAGTTCCACGAGCGCAAATTCAAGTACTCA
CAGTACGTCTGTGTGTTCCTCGATGCTACTTACATTCCGTTACGCCGTGGTACCGTTGAACGAGAAGCCGTTAACGTAGC
AATCGGAATTCGAAGTGACGGCGGTAAGGAAGTTCTTGACTACAGTATCGCACCGACCGAGAACGGAGCCGCTTGGTCTG
AACTACTCCAGGGATTACGCGCACGGGGGATTAAAGATATTCAGTTGTTCATCGCCGACGGTTTAGTTGGACTTCAATCT
GRGATTGAGGCTAACTACCCGCAGGCGAAGTTTCAACGGTGCTGGGTCCACGCAGAGCGCAACCTTTTAGGGTACGTTTG
CAAAAACGATCGCAGGGAGATTATCACCGACTTTAAGGCTATTCGGCAAGCAGAGAACCTACAAGCCGCCAAAGAACGAT
TGGCGGCTTTCAGTGCTAAGTGGGAGTCCAGTTATAAGCGTCGAATCAAGAATCTAGTCCAAATGGAGGAGCTATTCACG
TTCTTCAGTTTTCCAACTGCGATCCGTCAGACCATCTACTCGACGAACCTAATTGAGTCGTTCAATAAGAGCCTGAAGAA
GATGGTCCGACGTAAAGAGCAGTTCCCAAACGAAGGAGCCCTCGATCGCTTTATCATGACGCAAGTGATGGAGTACAACG
ATAAATTTGAGAATCGAGCACATCGGGGATTCAAGGACTGTCACGACACGCTTGATTCGATGTTTTAG

Protein sequence :
MNQFNKDIIAALSSDKDITLNEVLRRQIEVAANQFLQNELTAVLGYEPHTRIDRLKDDVNYRNGTYTRTIDTEYGEINLT
IPRDRLNKFQNALFPPYVRRTDGLEEMVIKMYSKGVTTREIADMVERMYGHYYSPTTVSNITKRTEHLVEEFHERKFKYS
QYVCVFLDATYIPLRRGTVEREAVNVAIGIRSDGGKEVLDYSIAPTENGAAWSELLQGLRARGIKDIQLFIADGLVGLQS
XIEANYPQAKFQRCWVHAERNLLGYVCKNDRREIITDFKAIRQAENLQAAKERLAAFSAKWESSYKRRIKNLVQMEELFT
FFSFPTAIRQTIYSTNLIESFNKSLKKMVRRKEQFPNEGALDRFIMTQVMEYNDKFENRAHRGFKDCHDTLDSMF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0595 NP_814357.1 ISEf1, transposase Not tested Not named Protein 1e-90 49
unnamed AAM21176.1 transposase Not tested Not named Protein 2e-90 49
unnamed AAM21184.1 transposase Not tested Not named Protein 2e-90 49
ef0057 AAM75262.1 EF0057 Not tested Not named Protein 2e-90 49