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Name : LC40_0079 (LC40_0079) Accession : YP_005848246.1 Strain : Lactobacillus fermentum CECT 5716 Genome accession: NC_017465 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : - COG ID : - EC number : - Position : 124458 - 125624 bp Length : 1167 bp Strand : + Note : - DNA sequence : GTGATCGGGATAAGGCCATGCAATCAATTATGGCCAAGATCCTTGATGAAATTCTTAAGTCCGAAAGCGACTGAGCAGAT TAAAGCTAAGGCTTATGAACGTTCGGATGAGCGAACCAATTCACGGAATGGTTATCGGGTTCGTCAGCTTACCACCCGCG TAGGGTCTCTAGAACTACACGTTCCTAAACTCCGTCATGGCAATTTTTCAACACAGCTGTTCAAACGCTACCAGCGTAGT GAGCAGGCCTTTGATTTGGCATTAATGGAAATGGTAATCCAAGGTGTTTCAACACGTAAAGTAGCTGAGATTACTAAGAA GTTATGTGGGACAACCTTTTCTAAAAGTACGGTCTCGGCTTTATGCAATAATTTGGACGACCAAGTGCTGGATTTTAACC GACGTCCCCTTACGCAAAAGTATGCTTTTGTGTATGCCGATGCAATTTTATTTAAGGTACACCGTGGTCACGTTGTGACA AGTAATAGCTTACTCGTTGCGATTGGAATCGACCCTAGCGGTCGTCGAGAAGTGCTCGGTTTTGATATCGGTGATAGTGA ATCAAAAGCTGCATGGATGGACTTCTTTAGTGAACTTAAACAGCGGGGCCTTACCAACGTTGATATGTTTGTTTCAGACG CTCATTGTGGCTTAAAGGATGCAATCACTACGCAATTTCAGGGTAGCCTTTGGCAGAGATGTCAATTTCATTTTAGTAAT GACTGTACAAGTATTCTGGCACTCAAGGATCGTAAAGAAGTTGCTAACCGACTCAAAGATTTATTTAATGCTCCAACGTA CGACCAAGCGGTTGAACGGCGTGACCAATTGGTTAAAGATTGGCAGACCGAGTTCCCTAAGGTGGTGAAGAAATTAGAAA ATAGTTTTGACGAATTAATGGTGATTTACCAGCTCCCAGAGGAGCTAAGGAAGCGTCTCCGGACGAATAATACAATTGAG CGGGTTAATCAAGAAATCCGTCGTCGTGACCGTGTAATCCGGATATTCCCGAATGATCTAAGCGTCTTGCGACTAATGGG AGCACTACTGATTGAACAGAATGAAAAATGGGCTGCTGGTCCACGGTACTTAAACATGACCGTTTACCACGGGATTGAAA AAGATGACAATTCAGAAGAAGCCGGTATGCTTAAGCTTGTGAAATGA Protein sequence : MIGIRPCNQLWPRSLMKFLSPKATEQIKAKAYERSDERTNSRNGYRVRQLTTRVGSLELHVPKLRHGNFSTQLFKRYQRS EQAFDLALMEMVIQGVSTRKVAEITKKLCGTTFSKSTVSALCNNLDDQVLDFNRRPLTQKYAFVYADAILFKVHRGHVVT SNSLLVAIGIDPSGRREVLGFDIGDSESKAAWMDFFSELKQRGLTNVDMFVSDAHCGLKDAITTQFQGSLWQRCQFHFSN DCTSILALKDRKEVANRLKDLFNAPTYDQAVERRDQLVKDWQTEFPKVVKKLENSFDELMVIYQLPEELRKRLRTNNTIE RVNQEIRRRDRVIRIFPNDLSVLRLMGALLIEQNEKWAAGPRYLNMTVYHGIEKDDNSEEAGMLKLVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0529 | NP_814305.1 | IS256, transposase | Not tested | Not named | Protein | 1e-61 | 41 |
| SERP1584 | YP_189149.1 | IS256-like transposase | Not tested | ¥ÕSP¥â | Protein | 1e-61 | 41 |
| SERP1587 | YP_189152.1 | IS256-like transposase | Not tested | ¥ÕSP¥â | Protein | 1e-61 | 41 |
| IS256 | BAC22941.1 | IS256 transposase | Not tested | etd PI | Protein | 8e-62 | 41 |
| unnamed | BAC67572.1 | transposase for insertion sequence element IS256 in transposon Tn4001 | Not tested | Type-IVc SCCmec | Protein | 8e-62 | 41 |
| unnamed | BAC67574.1 | transposase for insertion sequence element IS256 in transposon Tn4001 | Not tested | Type-IVc SCCmec | Protein | 8e-62 | 41 |
