Gene Information

Name : LC40_0752 (LC40_0752)
Accession : YP_005848855.1
Strain : Lactobacillus fermentum CECT 5716
Genome accession: NC_017465
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1332743 - 1333780 bp
Length : 1038 bp
Strand : -
Note : -

DNA sequence :
ATGCGTACTTCTAAAAATTTATCATTCATGGACCGTTATATGACCTTATGGGTATTTTTAGCTATGGCACTGGGAATTAT
TAGCGGTTTAGCTTTTCCATCGCTCCCTAAAATAATTAATAGTTGGTCTATCGGTACAACATCAATTCCAATAGCAATAG
GCTTAATATTAATGCTATATCCACCACTAACCAAAGTTAATTATGGCAAAATGGGTGATGTATTTAAGGACAAAAAGGAA
CTTGCTTTTTCATTAGTTCAAAATTGGATCGTTGGCCCTATTTTAATGTTTGCTCTTGCTGTTATCTTTCTACACAATTA
TCCAAACTATATGATTGGTTTAATCATGATCGGTTTAGCACGGTGTATTGCTATGGTTATTGTGTGGAATGAATTAGCGC
AGGGTAATAACGATTATGCTGCTGGTCTAGTAGCTTTTAACTCAATTTTTCAGATTTTGCTATATTCCGTTTATGCATAC
TTCTTTATTAGTGTCTTACCAAAATTTTTTGGGCTACAAACACAGACAATTAATATTACAATGAGTGAAATTGCTAAAAG
TGTTTTTATTTATCTTGGTATACCTTTCATTTTGGGCATTGGTTCTCGTTACTTTATCATTAGCACAAAGGGTAAAGAAT
GGTTTGAAGATAAATATGTACCAAAAATAAGCAGAATTACTACTTGGGCTTTACTCTTTACAATAGTAGTGATGTTTTCT
GTCAAGGGTGCAAAAGTAGTTCAACTACCAATGGACGCAATAAGAATTGCTGTTCCTTTATTACTATATTTTGTCTTAAT
GTTCTTCATAACCTTTTGGATTGCGAAAAAGACTAAAACTAGTTATTCAATTTCTGCGACACAATCTTTCACCGCTGCAA
GTAATAACTTTGAATTAGCTGTTGCAGTAACAGTCGCTATATTTGGCTTGAATTCTGGAGAAGCATTTGCTGCCGTTATT
GGCCCAATGGTTGAAGTACCGGTAATGATCTTATTAGTTGATGTAGCACTATGGATTAAAAGAAAATATTATGATTAA

Protein sequence :
MRTSKNLSFMDRYMTLWVFLAMALGIISGLAFPSLPKIINSWSIGTTSIPIAIGLILMLYPPLTKVNYGKMGDVFKDKKE
LAFSLVQNWIVGPILMFALAVIFLHNYPNYMIGLIMIGLARCIAMVIVWNELAQGNNDYAAGLVAFNSIFQILLYSVYAY
FFISVLPKFFGLQTQTINITMSEIAKSVFIYLGIPFILGIGSRYFIISTKGKEWFEDKYVPKISRITTWALLFTIVVMFS
VKGAKVVQLPMDAIRIAVPLLLYFVLMFFITFWIAKKTKTSYSISATQSFTAASNNFELAVAVTVAIFGLNSGEAFAAVI
GPMVEVPVMILLVDVALWIKRKYYD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 3e-78 57
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 9e-99 57
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 7e-99 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LC40_0752 YP_005848855.1 hypothetical protein BAC0573 Protein 5e-111 64
LC40_0752 YP_005848855.1 hypothetical protein BAC0004 Protein 1e-78 50