Gene Information

Name : LC40_0632 (LC40_0632)
Accession : YP_005848739.1
Strain : Lactobacillus fermentum CECT 5716
Genome accession: NC_017465
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1127089 - 1128231 bp
Length : 1143 bp
Strand : -
Note : -

DNA sequence :
ATGAAGTTTAATACCCAATTAATTCACGGCGGCATTAGCGAAGACCCAACCACCGGGGCGGTTTCGACCCCAATTTACCG
CTCCTCAACCTTCCGTCAACACGTCCTCGGCGGTGGCACCAAGTGGGAATATGCCCGGACCGGCAACCCGACCCGTGCCT
CCTTGGAACTCTTAATGGCCCAACTAGAAGAAGGGGTCGCTGGCTTCGCCTTTGCCTCGGGATCGGCTGCCATCCACGCC
GTCTTTTCCCTCTACTCCTCCGGCGATCACTTCATCGTTGGTAAGGACGTCTACGGGGGGACCTTCCGTTTGATCAACAA
GGTCCTGAAGCGTTTCGGCCTCGAATTTACGGTTGTCGACACCCAGGACCTAGCGGCGGTCGAAGCGGCCGTGCAGGACA
ACACGGTGGCCATTTACTTTGAAACACCCACCAACCCGCTCTTGGAGGTTTCAGARATCGAAGCGATTGCTAAGATCGCC
AAGAAGCATGGCTTAAAGACGGTCATTGATAACACCTTTGCCACGCCGTATAACCAACGCCCGCTGACCCTGGGCGCCGA
CATTGTAGTTCACTCCGCCACCAAGTACCTGGGCGGTCACTCCGACGTGGTGGGGGGGATTGCCGTTACGAACGACGAGG
AAATTGCCGAACAGTTGGCCTTCATCCAAAACTCAATTGGCGCTGTCCTTGGGCCCGATGACTCCTGGCTTCTGATGCGG
GGGATTAAGACCCTCGGCGCCCGAATGCGGATCCACCATGAAAACACCGCAGCCGTCATTGAACTGTTGGAAAAGGACCC
GCGGGTTGCTCGGGTACTGTACCCGGGGCTGCCAGATTTCCCGGGACATGATATCGCGGCTAAGCAAATGGACCACTTCG
GCGCCATGGTGTCCTTTGAACTGCAAGCGGGGCTCTCGGCAAAGAAGTTTGTCGAAAGCCTGCAGGTGATCACGCTGGCC
GAAAGCCTCGGTGGGATCGAGAGCCTGATTGAAGTGCCGGCGGTGATGACCCACGGTTCCATTCCGCGTGAGGTCCGCCT
GCAAAACGGGATTAAGGACGAATTAATCCGCTTGTCGGTTGGGATCGAAGACGAAGAAGACCTCGTGGCAGACTTACAGC
AAGCCCTGGACCAACTGTCATAA

Protein sequence :
MKFNTQLIHGGISEDPTTGAVSTPIYRSSTFRQHVLGGGTKWEYARTGNPTRASLELLMAQLEEGVAGFAFASGSAAIHA
VFSLYSSGDHFIVGKDVYGGTFRLINKVLKRFGLEFTVVDTQDLAAVEAAVQDNTVAIYFETPTNPLLEVSDIEAIAKIA
KKHGLKTVIDNTFATPYNQRPLTLGADIVVHSATKYLGGHSDVVGGIAVTNDEEIAEQLAFIQNSIGAVLGPDDSWLLMR
GIKTLGARMRIHHENTAAVIELLEKDPRVARVLYPGLPDFPGHDIAAKQMDHFGAMVSFELQAGLSAKKFVESLQVITLA
ESLGGIESLIEVPAVMTHGSIPREVRLQNGIKDELIRLSVGIEDEEDLVADLQQALDQLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 6e-78 52
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-79 52
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 6e-65 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LC40_0632 YP_005848739.1 cystathionine beta-lyase BAC0207 Protein 7e-66 44