Gene Information

Name : LC40_0065 (LC40_0065)
Accession : YP_005848232.1
Strain : Lactobacillus fermentum CECT 5716
Genome accession: NC_017465
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 107945 - 109045 bp
Length : 1101 bp
Strand : +
Note : -

DNA sequence :
GTGGCCGCTAATCAGTTCCTTCAAAATGAACTGACTGCGGTGATAGGCTACGAACCACATACTCGGATCGACCGATCAAA
AGACGACGTGAACTACCGGAACGGGACGTACACCCGCACGATCGACACTGAGTACGGTGAAAAAGGTCTGACGATCCCAC
GGGACCGGTTAAACAAGTTTCAAAACGCCCTCTTCCCTCCTTACGTGCGTCGGACTGATGGACTGGAGGAAATGGTCATC
AAGATGTACTCCAAGGGCGTCACAACTCGTGAAATCGCTGATATGGTTGAGAGAATGTACGGCCACTACTACTCACCAAC
CACGGTTTCAAACATCACTAAGCGGACGGAACACCTGGTTGAAGAGTTCCACGAGCGCAAATTCAAGTACTCACAGTACG
TCTGTGTGTTCCTCGATGCTACTTACATTCCGTTACGCCGTGGTACCGTTGAACGAGAAGCCGTTAACGTAGCGATCGGA
ATTCGAAGTGACGGCGGTAAGGAAGTTCTTGACTACAGTATCGCACCGACCGAGAACGGAGCCGCTTGGTCTGAACTACT
CCAGGGATTACGCGCACGGGGGATTAAAGATATTCAGTTGTTCATCGCCGACGGTTTAGTTGGACTTCAATCTGCGATTG
AGGCTAACTACCCGCAGGCAAAGTTTCAACGGTGCTGGGTCCACGCAGAGCGCAACCTTTTAGGGTACGTTCGCAAAAAC
GATCGCAGGGAGATTATCACCGACTTTAAGGCTATTCGGCAAGCAGAGAACCTACAAGCCGCCAAAGAACGATTGGCGGC
TTTCAGTGCTAAGTGGGAGTCCAGTTATAAGCGACGAATCAAGAATCTAGTCCAAATGGAGGAGCTATTCACGTTCTTCA
GTTTTCCAACTGCGATCCGTCAGACCATCTACTCGACGAACCTAATTGAGTCGTTCAATAAGAGCCTGAAGAAGATGGTC
CGACGTAAAGAGCAGTTCCCAAACGAAGGGGCCCTCGATCGCTTTATCATGACGCAAGTAATGGAGTACAACGATAAATT
TGAGAATCGAGCACATCGGGGATTCAAGGACTGTCACGACACGCTTGATTCGATGTTTTAG

Protein sequence :
MAANQFLQNELTAVIGYEPHTRIDRSKDDVNYRNGTYTRTIDTEYGEKGLTIPRDRLNKFQNALFPPYVRRTDGLEEMVI
KMYSKGVTTREIADMVERMYGHYYSPTTVSNITKRTEHLVEEFHERKFKYSQYVCVFLDATYIPLRRGTVEREAVNVAIG
IRSDGGKEVLDYSIAPTENGAAWSELLQGLRARGIKDIQLFIADGLVGLQSAIEANYPQAKFQRCWVHAERNLLGYVRKN
DRREIITDFKAIRQAENLQAAKERLAAFSAKWESSYKRRIKNLVQMEELFTFFSFPTAIRQTIYSTNLIESFNKSLKKMV
RRKEQFPNEGALDRFIMTQVMEYNDKFENRAHRGFKDCHDTLDSMF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0595 NP_814357.1 ISEf1, transposase Not tested Not named Protein 2e-86 50
unnamed AAM21176.1 transposase Not tested Not named Protein 4e-86 49
unnamed AAM21184.1 transposase Not tested Not named Protein 4e-86 49
ef0057 AAM75262.1 EF0057 Not tested Not named Protein 4e-86 49