Gene Information

Name : LC40_0535 (LC40_0535)
Accession : YP_005848645.1
Strain : Lactobacillus fermentum CECT 5716
Genome accession: NC_017465
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 960092 - 961000 bp
Length : 909 bp
Strand : +
Note : -

DNA sequence : 
ATGACTAAACTTGATACCCAGCTGGTGCACGGGCCAGCCGTTAATGACAACTGTACCGGCGCCGTGACCACGCCGATTTA
CAAGGCAACAACCTTTGAATACCCCGAAATTGGGGCGCCGGTRACCTACGATTACTCGCGCTCGGGGAACCCGACCCGCC
AGGCGGTCGAAAATCAACTGGCGACCTTGGAAGGGGGCCAGCGGGCCTTCACCTTTGCCTCCGGGATGGCCGCTATCCAC
GCCGCCTTGGCGATCTTTAAGGCCGGCGACCACCTGATCGTGGGTGACCAAATTTACGGCGGCACCTTCCGTTTGCTTTA
CCAATTTTTCGCCCGCTGGGGGCTTGAAATCACGGCGGTCGACACCCGCGACCCGCAAGCCATTGAGGCCGCCATCCAGG
ACAACACCAAGGCAATTTACTTTGAACCGGTTACCAACCCCTTGTTGCAGGTGACMTCGGTMCGCCAGGTRGCCGYGATT
GCCAAGCAACACGGGCTCCTGACGATCGTCGATAACACCTTTTTGAGCCCCTACCTCTTAAAGCCACTAGAGCTGGGCGC
CGATCTGGTCATCCATTCGGCGACTAAGTACTTAGCCGGGCACTCGGAACTCTCGGCCGGGGCCGTGATCGTCAACGATC
CGCGCTTAGCCGACCGGGTTTACTTCGTCCAAAACGCCCTCGGCGGGATTTTGTCGCCGGAGGGGGCCAACGAACTGGCC
CGCGGGATCAAGACACTCGGGATCCGCTTGGACCGCCAAATTGAAAACCTGGTGGAAGTCGTGAAGTTCCTGGAAACCCG
GCCGGAAGTCCAGCGGGTGTACTACCCGGGGTTGCCGGGCCACGAGGGTTACGAAGAATTGCGCCAGGAGGCCAAGGGGG
GCCGGGGGCGGTGCTCTCCTTTGAGCTAA

Protein sequence : 
MTKLDTQLVHGPAVNDNCTGAVTTPIYKATTFEYPEIGAPVTYDYSRSGNPTRQAVENQLATLEGGQRAFTFASGMAAIH
AALAIFKAGDHLIVGDQIYGGTFRLLYQFFARWGLEITAVDTRDPQAIEAAIQDNTKAIYFEPVTNPLLQVTSVRQVAXI
AKQHGLLTIVDNTFLSPYLLKPLELGADLVIHSATKYLAGHSELSAGAVIVNDPRLADRVYFVQNALGGILSPEGANELA
RGIKTLGIRLDRQIENLVEVVKFLETRPEVQRVYYPGLPGHEGYEELRQEAKGGRGRCSPLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-62 46
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-63 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LC40_0535 YP_005848645.1 cystathionine beta-lyase BAC0207 Protein 2e-43 41