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Name : LC40_0050 (LC40_0050) Accession : YP_005848218.1 Strain : Lactobacillus fermentum CECT 5716 Genome accession: NC_017465 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 85969 - 87267 bp Length : 1299 bp Strand : + Note : - DNA sequence : ATGTTAGACATCAAGCAAATTCGCCAACAACCGGACTGGTTCAAAGAAAAGCTGGCCACCCGGGGCGTTCAACCAGAAGA AATCGACGCCGTGCTGGAACTGGACGCCAAGCGGCGCGAACTCCTGCAACAAACCGAAACCCTGAAGGCCAAGCGTAACG AAGCCTCCAAGAAGATCGGGGAAGCTAAGCGGGCCAAGCAATCCGCTGACGAAGCAATTGCCGAGATGCGCCAAGTCGGC GAAGACATCAAGGCCTTAGACGAACAGGTGGAAGCAAACGACAAGGACCTCTTTGACAAGTTAGCCCACCTGCCGAACGT CCCTCACGAAGGGGTGCCGGTTAGCCTGACCGAAGATGGGGCCGAAGAACTGCGTAAGGTAGGTCAAGCCCGTCAATTCG ACTTTGAACCAAAGCACCACTGGGAAATCGGCGAAAACCTCGGGATTTTGGACTTTGAACGGGCCGGTAAGGTTTCTGGC TCCCGCTTCGTCTACTACGTCGGCCTCGGGGCTCAATTAGAACGGGCGCTGTACAACTTCATGCTCGATGAACACATGAA GGAAGGCTACACCGAAGTCTTGCCGCCGTACATCGTCAATGCTCACGCGATGTACGGGACCGGTCAATTCCCGAAGTTTA AGCAGGACGTTTACCAAGTGAACGGCGAAGACATGACCCTGATCCCGACCGCCGAAGTTCCGTTGACCAACTACTTTGCC GGCGAAGTGATCCCCGCAGAAAAGCTGCCGGTTTACGTGACGGCCTTGACGCCTAGCTTCCGTTCCGAAGCTGGGTCAGC TGGTCGCGATACCCGCGGGTTGATCCGGATGCACCAATTCAACAAGGTCGAAATGGTTAAGTACACCAAGCAAGATCAAT CCTGGGAAGAACTCGACAAGATGACGGCCAACGCCGAAAACATCCTCCAAAAGCTCGGCCTGCCGTACCACGTCATCACC CTGACGACTTCGGACATGAGCTTCACGGCCTCCGAAACCCACGACTTGGAACTGTGGATGCCGGCCCAAAATAAGTACCG GGAAGTTTCCTCTTGCTCCAACTGCTTGGACTTCCAAGCCCGGCGCCTGCACATGCAATACCGGGACGAAAACGGTAAGC TCCAATACGTGCACACCCTGAACGGTTCTGGTTTAGCCGTTGGGCGGACGTTGGCGGCCATCTTAGAAAACTACCAAAAC GAAGACGGCTCCGTGACGATTCCAGAAGTGCTGGTACCGTACTTCCACGGCATCACCAAGATCACCAAGGAAAACGCCGT GCCGTTTAACAACAAGTAA Protein sequence : MLDIKQIRQQPDWFKEKLATRGVQPEEIDAVLELDAKRRELLQQTETLKAKRNEASKKIGEAKRAKQSADEAIAEMRQVG EDIKALDEQVEANDKDLFDKLAHLPNVPHEGVPVSLTEDGAEELRKVGQARQFDFEPKHHWEIGENLGILDFERAGKVSG SRFVYYVGLGAQLERALYNFMLDEHMKEGYTEVLPPYIVNAHAMYGTGQFPKFKQDVYQVNGEDMTLIPTAEVPLTNYFA GEVIPAEKLPVYVTALTPSFRSEAGSAGRDTRGLIRMHQFNKVEMVKYTKQDQSWEELDKMTANAENILQKLGLPYHVIT LTTSDMSFTASETHDLELWMPAQNKYREVSSCSNCLDFQARRLHMQYRDENGKLQYVHTLNGSGLAVGRTLAAILENYQN EDGSVTIPEVLVPYFHGITKITKENAVPFNNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-129 | 62 |
