Gene Information

Name : LC40_0420 (LC40_0420)
Accession : YP_005848537.1
Strain : Lactobacillus fermentum CECT 5716
Genome accession: NC_017465
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 714475 - 715206 bp
Length : 732 bp
Strand : -
Note : -

DNA sequence :
GTGGTCCCCGGAACAGATTTCAGGTCGGTTTTAGTCCCACCGAAAACAAGCGAATGGCGTATCAGTTATAACACCATTTA
TCGTMGGATTGAACGCGATAATTTAGGCATCAAACGTAAGAGTCACGGGGCTCGTGGCTTTGCCCGTAAGCTCCGTCACC
GTGGTAAAACCCGAAAGGTCAAGGGAACCATTAAGGAACGTCGAGGACGATTTAACGACGTCCCTTCCGTTCATGAACGC
CCGGTTTCATGTGAGAATCGAAGCCGGTTTGGTCATTGGGAAGGTGATACAATTCGCGGTAAAACCGGGCGTTCAGCCCT
GGTAACCTTAGTGGACCGTAAATCTCGGTATTTATTATCTCAGCGCGTTCTCAAAGTAAACGCCAAGAACGTCACACAAG
CGATGATTGACCTCCTGCATACCGTAACGCCTAAACGCGTTCGGACGCTTACGCCGGACCGTGGAACTGAATTCGCAGGA
TACCGTGAAGTTAGCCAAGAACTAAGCATTCCAGTCTATTTTCCCGATCCCCATGCGCCCCAACAACGGGGAACCAATGA
GAATACCAACGGGCTTATCCGTGAGTATTTCCCCAAAGGAACCGACCTAGACCAACTAACTGATCAAGATATCGACAAGT
TTGTCAGGGATTTAAATCACCGACCACGTAAGGTCTTAGGCTGGAAGAGTCCATTTGAAGTTTTCTTCGGGACAAAGTTG
CGCTTGATTTGA

Protein sequence :
MVPGTDFRSVLVPPKTSEWRISYNTIYRXIERDNLGIKRKSHGARGFARKLRHRGKTRKVKGTIKERRGRFNDVPSVHER
PVSCENRSRFGHWEGDTIRGKTGRSALVTLVDRKSRYLLSQRVLKVNAKNVTQAMIDLLHTVTPKRVRTLTPDRGTEFAG
YREVSQELSIPVYFPDPHAPQQRGTNENTNGLIREYFPKGTDLDQLTDQDIDKFVRDLNHRPRKVLGWKSPFEVFFGTKL
RLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_02710 YP_005176177.1 ISApl1 transposase Not tested ICEPmu1 Protein 8e-46 50
EXB5 ABD94692.1 putative IS30 family transposase Not tested ExoU island B Protein 7e-20 44
CDCE8392_1981 YP_005134512.1 transposase-like protein Not tested Not named Protein 4e-19 42