Gene Information

Name : LC40_0278 (LC40_0278)
Accession : YP_005848418.1
Strain : Lactobacillus fermentum CECT 5716
Genome accession: NC_017465
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 472803 - 473696 bp
Length : 894 bp
Strand : +
Note : -

DNA sequence :
GTGACCTTAATTGATGATCTGAGGCGAGTCTTCAAAACGTCGATTAGTTTTATCCTCAAAGCCGTTAAGATACCACGTAG
CACGTACTATTACACTAAGCACAGCCAGGGACGAAAATATGATGATGACCAGGTTATCCAAGCCATTGATGAAATTCGCC
AAACAGATGCCAAGTATACTCAAAAATACGGTTACCGTCGCATAACGTTAGTTATGCATGAACAGGGATTTAAAGTTAAT
CACAAATGCGTCCTCCGAATTATGAAGGAACAAGGCTGGACATGTCAGGCCTTTAATAAGCAAACTCGTAAATATAACTC
ATACAAAGGAGTTGTTGGTATAATCGCCAAAAACAAGTTACACCGGCGATTCAAGACAGATCGACCATATCAAAAACTTG
TCGCCGACGTTAGTGAATTTCGATACGGTCAGATGAGTCAAAGTGAACGAATCTATTTAGAGCCCATCATGGATTTATTT
TCGGGTGAAATTTTGGCATTTAACATTAGTGCACATCCAACTCTTGAGTTTGCGTTGAAGCCACTAAAAGAAGCATTAGA
TGGACTACCTGAGCTTCCTTATCGAACAACGGTACACACAGATCAAGGATTTCAGTACCAACATAAGCAGTGGCAAAAAA
CGCTTAAAACTCATCATACCTTTCAGAGTATGTCCCGTAAGGCGACTTGCTTAGATAACGCCGCCATGGAATCATTCTTT
CATCTCATGAAAGCAGAGATGATGGATGAACACTTCGAAAATCCAGAGAGTCTCGCGCAAGCGATGACTGAATGGATTGA
GTTTTATAATAACCGTAGAATCAGGACCAAGCTAAAAGGCAAGTCACCAGTACAATACCGAGAACTTGCCAATCGAGTTA
GTAGCTTAATTTAG

Protein sequence :
MTLIDDLRRVFKTSISFILKAVKIPRSTYYYTKHSQGRKYDDDQVIQAIDEIRQTDAKYTQKYGYRRITLVMHEQGFKVN
HKCVLRIMKEQGWTCQAFNKQTRKYNSYKGVVGIIAKNKLHRRFKTDRPYQKLVADVSEFRYGQMSQSERIYLEPIMDLF
SGEILAFNISAHPTLEFALKPLKEALDGLPELPYRTTVHTDQGFQYQHKQWQKTLKTHHTFQSMSRKATCLDNAAMESFF
HLMKAEMMDEHFENPESLAQAMTEWIEFYNNRRIRTKLKGKSPVQYRELANRVSSLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 4e-43 41
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 2e-33 41
CDBH8_0905 YP_005159997.1 transposase-like protein Not tested Not named Protein 2e-33 41