Gene Information

Name : LC40_0184 (LC40_0184)
Accession : YP_005848329.1
Strain : Lactobacillus fermentum CECT 5716
Genome accession: NC_017465
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 311539 - 313716 bp
Length : 2178 bp
Strand : +
Note : -

DNA sequence :
GTGGAAACAGAAGTACTAACCCGGGTGCAGGCTAAGCTCACCCAATTCAAGGGCGCCCAAGTGCGGGTGGCCCTTGATTT
ATTAAACGATGGCAACACGATCCCCTTTGTCGCTCGGTACCGCAAGGAGGCGACGGGGGCGTTAGACGAAGTGGCCCTAC
AAACGATTCAAGAACAGGCTAAAAAAGAGCAGGAACTCTTTGACCGCAAAAACGCCGTGATTAAGTTGATCGAGGCGGCG
GGGAAGTTAACGGCACCGCTACAAGAAAAAATTCAGGGCGCCGATGACTTAGCCACCGTTGAAGACCTGTACTTACCGTA
CAAGCAAAAACGGCGGACCAAGGCCCAAGTGGCTAAGGAAAACGGTTTGATGCCGTTAGCCAACTGGCTGCTCAAGTATG
AGACCGCGGACCCGAAAACAGAAGCGGCGCACTACGTTAATCAAGAGGTGCCAGACGTTGAGGCGGCCCTGGCCGGCGCG
CACGAAATTCTCGCCGAGGGGATTGCCGAAATGGCGACGGTGCGCAGCTGGTTGCGTAATTACACCACTGAGCACGGCAG
GTTAGAAGTCGCCGTCAAAAAGGACGGGGAGCAACTTGATGAGCGAGGCGTTTACGAGCAGTACTATGACTTTAGCGAGC
AGGTTAGCCAGCTTAGCTCCTACCAGATCCTAGCGATCAACCGGGGGGAAAAGGAGAAAATTCTGCGGGTTAAGGTGGTG
GCCGACCCAACCACGGTAATCAACTACCTGAACTTCCGCCTGGTACGTGGCCACCAGCCAAACGCCGCGACCGAGTTGGT
GGAAGCGGCGGCCAAAGACGCCTATAAGCGCTTTTTGGGACCGGCGATTGAGCGGGAGGTGCGCACTAAGTTAACCGAAG
GGGCCAGCGCCCGGGCAATCAAGGTCTTTGGGCAAAACCTCTACCACCTTTTGATGCAAGCGCCGTTAAAGGGCCGGGTG
GTGTTAGGTTTTGACCCYGCCTACCGGACCGGGTGCAAGTTGGCGGTGTTAGATCCCCACGGGAAGGTGGAACAAATTGC
CGTCATCTACCCCCACAAACCCGCCCCGGAAGCTAAGCGGGCCCAGGCCGAAGCGGAGTTTTTGGACCTGGTGGAACGCT
ACCAGGTTTCGACGGTCGCAATCGGGAACGGGACGGCCAGCCGTGAATCCGAGCAGTTTGTGGCTACGGCCCTGCAAAAG
CTTAGCCGGCCAGTCTACTACGTAATTGTCAATGAAGCCGGGGCGTCGGTCTACTCGGCCTCGCCAGCCGCCAGAGAAGA
ATTCCCGGACCTGACGGTGGAAAAGCGGAGCGCCATTTCAATTGGGCGCCGCCTCCAGGATCCGTTGGCGGAACTGGTTA
AGATTGATCCGCAAGCCATTGGGGTCGGCCAGTACCAACACGACCTCCCGGAAAAGGAGTTAGCGAGTGAGCTCGACGCC
GTTGTTGAACGGGCCGTTAACCGGGTGGGGGTTAATTTGAACACCGCTTCCTACCAGCTACTAACCCGGATTTCGGGGTT
GACCAAGACGATTGCCCAAAACATCGTTGCTTACCGCAATGATAACGGCGCCTACACGAACCGGAATCAGTTAAAAAAGG
TTCCCCGCCTCGGGCCCAAGGCCTTTCAACAAGCGGTCGGCTTTTTACGGATCGTCGGTGGGCAAAACCCGCTCGATAAC
ACCGATGTCCACCCGGAAAGCTACCCGGTGGCCAAGTCAATTTTGGCGGCGGCCGACGTAACGGTGACCGAGCTGGGCAC
CGAGCAGGCCAACGCCCGGCTGGCTAAGCTTCAGCCAGCGGACTTCGTGTCCGAAACGGTCGGCTTAGCAACGGTAAAAG
ACGTGCTAGAGGCCCTGCAAAAGCCGGGGCGGGACCTACGCGACGGGATGCCGGCGCCGTTACTGCGTCAGGACGTAATG
ACGATGGATGACTTAAAGCCCGGCATGCAACTAGAGGGAACGGTGCGCAACGTCGTCGACTTCGGCGCCTTTATTGACAT
CGGGGTTAAACACGATGGCTTAGTCCACCTATCGCGGATGGCTAAGAAGTACCCGAAGGATCCGCACAGCCTACTGGCGG
TTGGCGACATCGTCACCGTTTGGGTGCACGCCGTTGATAAACAGCGTGACCGGATTCAGTTGACCATGTTGCCACCAAAG
AAGGGTGACAATGACTAA

Protein sequence :
METEVLTRVQAKLTQFKGAQVRVALDLLNDGNTIPFVARYRKEATGALDEVALQTIQEQAKKEQELFDRKNAVIKLIEAA
GKLTAPLQEKIQGADDLATVEDLYLPYKQKRRTKAQVAKENGLMPLANWLLKYETADPKTEAAHYVNQEVPDVEAALAGA
HEILAEGIAEMATVRSWLRNYTTEHGRLEVAVKKDGEQLDERGVYEQYYDFSEQVSQLSSYQILAINRGEKEKILRVKVV
ADPTTVINYLNFRLVRGHQPNAATELVEAAAKDAYKRFLGPAIEREVRTKLTEGASARAIKVFGQNLYHLLMQAPLKGRV
VLGFDPAYRTGCKLAVLDPHGKVEQIAVIYPHKPAPEAKRAQAEAEFLDLVERYQVSTVAIGNGTASRESEQFVATALQK
LSRPVYYVIVNEAGASVYSASPAAREEFPDLTVEKRSAISIGRRLQDPLAELVKIDPQAIGVGQYQHDLPEKELASELDA
VVERAVNRVGVNLNTASYQLLTRISGLTKTIAQNIVAYRNDNGAYTNRNQLKKVPRLGPKAFQQAVGFLRIVGGQNPLDN
TDVHPESYPVAKSILAAADVTVTELGTEQANARLAKLQPADFVSETVGLATVKDVLEALQKPGRDLRDGMPAPLLRQDVM
TMDDLKPGMQLEGTVRNVVDFGAFIDIGVKHDGLVHLSRMAKKYPKDPHSLLAVGDIVTVWVHAVDKQRDRIQLTMLPPK
KGDND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 2e-133 45