Gene Information

Name : LC40_1107 (LC40_1107)
Accession : YP_005849165.1
Strain : Lactobacillus fermentum CECT 5716
Genome accession: NC_017465
Putative virulence/resistance : Unknown
Product : DeoX family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1980492 - 1981517 bp
Length : 1026 bp
Strand : +
Note : -

DNA sequence :
ATGAAGAAATTTAACCTGAGCCATGAAATGTTTTCCGCCGCTACGTTTGACCTTTACGAAGACGACAACTTTAGGGTATC
AACCTTCAAGTACCCCTCTGGTGTTGAAGCTCTGAAGGTGTCCAACAGCCGGGGTTACCTCACTCTCTTACCGTTCTATG
GTTTGATGGTTTGGGACGCTGTTTTTGATGGCATCACCTTGAAGGAAAAAGATGGTTTCAGTCAGCCACTTTTCGGTAAG
CAGATCTCTGACACTTACGGCGCCTTTGAATTTACCTCCGGCTTACTGGCAAACGGGAACCCCAGCCCCGAGGATAACCA
CGTTCAACACGGGGAGTTTGCAACGGCACGCATGGATCACGCAGCACTAGTTGTTGATGATGATACCATCACTGTTACTA
GCGATTACGAGTACATCAAGGGTTTTGGTGACCACTACCTAGCCACCCCATCAGTTACGATGCGCAAGGACAGCGGCCTC
TTTGATATTGAGCAGCACGTCAAGAACCTGTCTAACTGTGCCCCAATGACCTTGCAATACATGTGTCACCTTTGCTACGC
CTACGTTGATAACGCAACAATGACGTCCAACATTCCTGATGAAGCCTTCCAGCTACGGACCTCCGTCCCGGCCCACGTTC
ACCCAACTCCAGAATGGACGGCCTTCACTAAGGAATTAGAGGAGAGTGGCAAGTTAATTGACAAGCTCGATGACCCAAGT
CACTACGATCCAGAAATCGTCTTCTTCTCCTCCGACTTAACTAAATACACTGACACCGCAGAATTCCGGGTTGACCTTGG
AAATGGTCATAACTTCTTAACCACTTACAAGACCGCCGAGCTACCAATCGTTACCCGTTGGATTCTTTATAACGGTGATC
AACAAGTCAACGCTTTTGCCCTACCAGGAACTTGCACCCCGGAAGGCCAATTAGCCGCTAAAAACGCCGGCACTCTTATC
ACACTCAAGCCGCAAGAAGAACGTCACTTCCACGTTGTTACTGGTYTAAAAGAACTAARYAYMTAG

Protein sequence :
MKKFNLSHEMFSAATFDLYEDDNFRVSTFKYPSGVEALKVSNSRGYLTLLPFYGLMVWDAVFDGITLKEKDGFSQPLFGK
QISDTYGAFEFTSGLLANGNPSPEDNHVQHGEFATARMDHAALVVDDDTITVTSDYEYIKGFGDHYLATPSVTMRKDSGL
FDIEQHVKNLSNCAPMTLQYMCHLCYAYVDNATMTSNIPDEAFQLRTSVPAHVHPTPEWTAFTKELEESGKLIDKLDDPS
HYDPEIVFFSSDLTKYTDTAEFRVDLGNGHNFLTTYKTAELPIVTRWILYNGDQQVNAFALPGTCTPEGQLAAKNAGTLI
TLKPQEERHFHVVTGLKELXX

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoM ADD91724.1 deoxyribose specific mutarotase DeoM Not tested PAI-I AL862 Protein 9e-80 52
unnamed CAE85171.1 hypothetical protein Not tested PAI V 536 Protein 4e-80 51