Gene Information

Name : LC40_1102 (LC40_1102)
Accession : YP_005849160.1
Strain : Lactobacillus fermentum CECT 5716
Genome accession: NC_017465
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1972474 - 1973661 bp
Length : 1188 bp
Strand : -
Note : -

DNA sequence :
ATGAACCAGTTTAACAAAGATATTATCGCAGCGCTATCTTCAGACAAAGATATTACCCTGAATGAAGTCTTACGTCGTCA
AATTGAAGTGGCCGCTAATCAGTTCCTTCAAAATGAACTGACTGCGGTGCTAGGCTACGAACCACATACCCGGATCGATC
GATCAAAAGACGACGTGAACTACCGGAACGGGACGTACACCCGCACTATCGACACTGAGTACGGTGAAATTAATCTGACG
ATCCCACGGGACCGGTTAAACAAGTTTCAAAACGCCCTCTTCCCTCCTTACGTGCGTCGGACTGATGGACTGGAGGAAAT
GGTCATCAAGATGTACTCCAAGGGCGTCACAACTCGTGAAATCGCTGATATGGTTGAGAGAATGTACGGCCACTACTACT
CACCAACCACGGTTTCAAACATCACTAAGCGGACGGAACACCTGGTTGAAGAGTTCCACGAGCGCAAATTCAAGTACTCA
CAGTACGTCTGTGTGTTCCTCGATGCTACTTACATTCCGTTACGCCGTGGTACCGTTGAACGAGAAGCCGTTAACGTAGC
GATCGGAATTCGAAGTGACGGCGGTAAGGAAGTTCTTGACTACAGTATCGCACCGACCGAGAACGGAGCCGCTTGGTCTG
AACTACTCCAGGGATTACGCGCACGGGGGATTAAAGATATTCAGTTGTTCATCGCCGACGGTTTAGTTGGACTTCAATCT
GCGATTGAGGCTAACTACCCGCAGGCGAAGTTTCAACGGTGCTGGGTCCACGCAGAGCGCAACCTTTTAGGGTACGTTCG
CAAAAACGATCGCAGGGAGATTATCACCGACTTTAAGGCTATTCGGCAAGCAGAGAACCTACAAGCCGCCAAAGAACGAT
TGGCGGCTTTCAGTGCTAAGTGGGAGTCCAGTTATAAGCGTCGAATCAAGAATCTAGTCCAAATGGAGGAGCTATTCACG
TTCTTCAGTTTTCCAACTGCGATCCGTCAGACCATCTACTCGACGAACCTAATTGAGTCGTTCAATAAGAGCCTGAAGAA
GATGGTCCGACGTAAAGAGCAGTTCCCAAACGAAGGGGCCCTCGATCGCTTTATCATGACGCAAGTGATGGAGTACAACG
ATAAATTTGAGAATCGAGCACATCGGGGATTCAAGGACTGTCACGACACGCTTGATTCGATGTTTTAG

Protein sequence :
MNQFNKDIIAALSSDKDITLNEVLRRQIEVAANQFLQNELTAVLGYEPHTRIDRSKDDVNYRNGTYTRTIDTEYGEINLT
IPRDRLNKFQNALFPPYVRRTDGLEEMVIKMYSKGVTTREIADMVERMYGHYYSPTTVSNITKRTEHLVEEFHERKFKYS
QYVCVFLDATYIPLRRGTVEREAVNVAIGIRSDGGKEVLDYSIAPTENGAAWSELLQGLRARGIKDIQLFIADGLVGLQS
AIEANYPQAKFQRCWVHAERNLLGYVRKNDRREIITDFKAIRQAENLQAAKERLAAFSAKWESSYKRRIKNLVQMEELFT
FFSFPTAIRQTIYSTNLIESFNKSLKKMVRRKEQFPNEGALDRFIMTQVMEYNDKFENRAHRGFKDCHDTLDSMF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0595 NP_814357.1 ISEf1, transposase Not tested Not named Protein 2e-92 49
unnamed AAM21176.1 transposase Not tested Not named Protein 3e-92 49
unnamed AAM21184.1 transposase Not tested Not named Protein 3e-92 49
ef0057 AAM75262.1 EF0057 Not tested Not named Protein 3e-92 49