Gene Information

Name : xerD (IALB_0365)
Accession : YP_005845345.1
Strain : Ignavibacterium album JCM 16511
Genome accession: NC_017464
Putative virulence/resistance : Unknown
Product : site-specific recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 395535 - 396425 bp
Length : 891 bp
Strand : -
Note : -

DNA sequence :
ATGAATATTTTTCTTAAGGAATATCTCGCTACTCTTAAGATAGAAAAAAATCTTTCTGAGAATACTATTAATTCTTATAA
AAGCGATTTGACTTCATTTCTTAATTTTATCTCTCAATCAGGAGTTGATGATTTATCTGATATAAAAGCAGATCAGATTG
CTTCATTCTTTAAACTTCTTAAAGATGCAGGATTGAATGAAACTTCTGCTGCAAGATATTTTTCTTCGCTGAAAGGTTTT
TTCAAATATCTTTTCAGGAATGGTTACATTAAATCAAATCCGATTGAAAGAATTCAACCACCCAAAATATCACGAAAACT
TCCTGAGGTTCTTAATGTCAGAGAAATAAATTCGATTCTTGATCAGCCGGATGTCAAAGATACAATCGGCTTAAGAGATA
AAGCTATTCTCGAAGTGTTTTATGCTTGCGGAACAAGAATTTCAGAGCTAATAAATATTAAACTGAACGATCTTTTTCTT
TCGGAAGAAGTAATCAGAGTTTTTGGTAAAGGTTCAAAAGAAAGATTAATTCCAATCGGTTCATCAGCTATTAAATGGGT
TGAAGAATATCTTCAGAAAAGCAGACCACTACTTGCAAAGAATTATAAAAGTGAAAATTATCTTTTCCTTAATCAGCGCG
GAACAAAATTTTCACGAATGGGAATCTGGAAAATTGTAAATCACTATGCCAGGCAAGCCGGTATTGAAAAGAGTGTTCAT
CCACACACATTCAGACATTCTTTTGCAACTCATCTTATTGAAGGCGGAGCAGATTTACGAGCAGTTCAGGAAATGCTTGG
TCATTCTGATATTTCAACTACTCAGATTTATACTCACATTGACAGAGATTATATCAAGTTAGTTCATAAAAAATATCATC
CGAGAGGTTAA

Protein sequence :
MNIFLKEYLATLKIEKNLSENTINSYKSDLTSFLNFISQSGVDDLSDIKADQIASFFKLLKDAGLNETSAARYFSSLKGF
FKYLFRNGYIKSNPIERIQPPKISRKLPEVLNVREINSILDQPDVKDTIGLRDKAILEVFYACGTRISELINIKLNDLFL
SEEVIRVFGKGSKERLIPIGSSAIKWVEEYLQKSRPLLAKNYKSENYLFLNQRGTKFSRMGIWKIVNHYARQAGIEKSVH
PHTFRHSFATHLIEGGADLRAVQEMLGHSDISTTQIYTHIDRDYIKLVHKKYHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-53 43
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-53 43