Gene Information

Name : fliI (IALB_2540)
Accession : YP_005847511.1
Strain : Ignavibacterium album JCM 16511
Genome accession: NC_017464
Putative virulence/resistance : Virulence
Product : flagellum-specific ATP synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2891216 - 2892532 bp
Length : 1317 bp
Strand : -
Note : -

DNA sequence :
ATGATGTTTGAACTTGCAAAAAAATATAAGAGCATAATAAGAGATACTGATACAATCAAACTTAGTGGAAAAGTAAATGA
TGTAATCGGATTAGTCATTGTTTCAGCCGGACCGAATGTATCACTCGGTGAGATTTGTTCTATAATTGACAGAAACGGAA
ACGAAGTATGCAAATCGGAAGTTGTTGGTTTCAAAGACGGTAAAGTTCTTTCTGTTGCGTTGGGAGAAGTACAAAACATT
TCACCGAAATCGGAAATTATAGCCGAAGGTAAATCATTCTCGGTTGGTGTTGGAAAAGAATTGTTGGGAAGAGTTATTGA
CGGTCTCGGAAATCCAATAGATGGAAAAGGTGAGTTAAAAGTAACTTCATACAGATCAATTTATCGTGAAGCACCAAACC
CGTTACAAAGAAAAAGAATAGAAACACCATTACAAACAGGTGTTCGTGCTATTGATGGATTACTTACAATCGGCAAGGGA
CAGCGAATGGGAATTTTTGCTGGCAGTGGTGTTGGCAAAAGCGTTACACTTGGAATGATTGCACGCAATACTAACGCTGA
TGTCAATGTTATCACACTGATTGGAGAAAGAGGAAGGGAAGTAAGAGAATTTATCGAAAGAGATTTAGGTGAAGAGGGAT
TGCAAAGATCAGTTGTTGTTGTAGCAACAAGTGATAAGTCTGCGTTGATTCGAATGAAAGGTGCTTACATCGGAACAACG
ATTGCAGAATATTTCCGTGATCTTGGAATGGATGTTTTGTTGATGATGGATTCGGTAACAAGATTTGCAATGGCACAACG
AGAAATAGGTCTTGCAATCGGTGAACCGCCAACCACAAAAGGATATACTCCAAGTGTTTTTGCAACACTACCGAAACTTT
TGGAAAGAGCCGGCACTTCTGATAAAGGTTCAATTACTGGTTTGTATAATGTACTTGTTGATGGTGATGATTTGACTGAA
CCAATTGCTGATGCAGCTCGTTCGATACTTGACGGTCATATTGTCTTGTCGCGTCGCCTTGCCAACAGCGGTCAATTTCC
TGCTGTTGATCCTTTACAAAGTGTTAGCAGAGTAATGCCCGATATTACAACAAACGATCACAGAGAACGAATAAAAATTT
TTAATGAAATACTTGCAACCTATAAAGAAGCAGAAGATCTGATTAACATCGGAGCATATGTAAAGGGAAGTAACCCGGCA
ATTGATCATGCGCTTTCAAAAATTTCTCAACTGAAATCATTTTTAAGACAGGATATGTTTGAGAAGACAGACTTTAATTC
AACAATTAAAAGATTAAATGAAATTATTCAACTATGA

Protein sequence :
MMFELAKKYKSIIRDTDTIKLSGKVNDVIGLVIVSAGPNVSLGEICSIIDRNGNEVCKSEVVGFKDGKVLSVALGEVQNI
SPKSEIIAEGKSFSVGVGKELLGRVIDGLGNPIDGKGELKVTSYRSIYREAPNPLQRKRIETPLQTGVRAIDGLLTIGKG
QRMGIFAGSGVGKSVTLGMIARNTNADVNVITLIGERGREVREFIERDLGEEGLQRSVVVVATSDKSALIRMKGAYIGTT
IAEYFRDLGMDVLLMMDSVTRFAMAQREIGLAIGEPPTTKGYTPSVFATLPKLLERAGTSDKGSITGLYNVLVDGDDLTE
PIADAARSILDGHIVLSRRLANSGQFPAVDPLQSVSRVMPDITTNDHRERIKIFNEILATYKEAEDLINIGAYVKGSNPA
IDHALSKISQLKSFLRQDMFEKTDFNSTIKRLNEIIQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 7e-111 54
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-106 53
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-107 53
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 4e-107 53
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 4e-107 53
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-106 53
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 3e-105 52
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-105 52
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-105 52
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 2e-106 50
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 2e-88 47
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-88 47
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 6e-89 47
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 5e-89 47
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 4e-89 47
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 2e-88 46
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 5e-86 46
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 5e-86 46
unnamed AAL06369.1 EscN Virulence LEE Protein 3e-85 46
escN AAC38383.1 EscN Virulence LEE Protein 4e-86 45
escN AAL57542.1 EscN Virulence LEE Protein 7e-86 45
escN AAC31513.1 L0034 Virulence LEE Protein 6e-86 45
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 6e-86 45
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 9e-86 45
escN NP_290268.1 hypothetical protein Virulence LEE Protein 8e-86 45
ECs4568 NP_312595.1 EscN Virulence LEE Protein 8e-86 45
escN CAI43874.1 EscN protein Virulence LEE Protein 4e-86 45
escN CAC81862.1 EscN protein Virulence LEE II Protein 8e-86 45
escN YP_003236088.1 translocator EscN Virulence LEE Protein 6e-86 45
escN AAK26715.1 EscN Virulence LEE Protein 7e-86 45
escN YP_003223475.1 translocator EscN Virulence LEE Protein 5e-86 45
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 2e-80 45
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 3e-76 44
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 3e-72 44
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 5e-85 44
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 7e-79 43
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 3e-79 43
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 1e-79 43
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 7e-75 43
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 4e-76 43
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 3e-76 43
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 4e-71 41
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 4e-72 41
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 4e-72 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_005847511.1 flagellum-specific ATP synthase VFG2144 Protein 6e-113 53
fliI YP_005847511.1 flagellum-specific ATP synthase VFG0390 Protein 5e-109 52
fliI YP_005847511.1 flagellum-specific ATP synthase VFG0192 Protein 4e-111 51
fliI YP_005847511.1 flagellum-specific ATP synthase VFG0048 Protein 9e-108 51
fliI YP_005847511.1 flagellum-specific ATP synthase VFG2331 Protein 2e-97 49
fliI YP_005847511.1 flagellum-specific ATP synthase VFG0515 Protein 2e-89 47
fliI YP_005847511.1 flagellum-specific ATP synthase VFG1254 Protein 3e-99 47
fliI YP_005847511.1 flagellum-specific ATP synthase VFG2499 Protein 1e-93 47
fliI YP_005847511.1 flagellum-specific ATP synthase VFG0730 Protein 2e-86 45
fliI YP_005847511.1 flagellum-specific ATP synthase VFG0812 Protein 3e-86 45
fliI YP_005847511.1 flagellum-specific ATP synthase VFG2459 Protein 2e-78 43
fliI YP_005847511.1 flagellum-specific ATP synthase VFG1008 Protein 3e-72 43
fliI YP_005847511.1 flagellum-specific ATP synthase VFG1778 Protein 2e-73 42